Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1RC7
BPC Identified: 20
Ambiguities: 0
dsRNA |
1RC7 |
1!B:20!C |
G:C |
WC [cWW][XIX] |
10.64 |
54.45; 53.25 |
1.2 |
-4.16 |
0.03 |
4.79 |
dsRNA |
1RC7 |
2!B:19!C |
G:C |
WC [cWW][XIX] |
10.37 |
52.4; 57.28 |
4.88 |
-11.69 |
0.28 |
16.17 |
dsRNA |
1RC7 |
3!B:18!C |
C:G |
WC [cWW][XIX] |
10.84 |
54.29; 55.3 |
1.01 |
-9.32 |
0.18 |
14.24 |
dsRNA |
1RC7 |
4!B:17!C |
G:C |
WC [cWW][XIX] |
10.71 |
54.29; 54.58 |
0.29 |
-5.7 |
0.21 |
10.75 |
dsRNA |
1RC7 |
5!B:16!C |
C:G |
WC [cWW][XIX] |
10.54 |
55.44; 54.55 |
0.89 |
-2.39 |
0.15 |
8.02 |
dsRNA |
1RC7 |
6!B:15!C |
G:C |
WC [cWW][XIX] |
10.63 |
52.27; 56.1 |
3.83 |
-6.86 |
0.03 |
10.6 |
dsRNA |
1RC7 |
7!B:14!C |
C:G |
WC [cWW][XIX] |
10.34 |
55.74; 53.95 |
1.79 |
-7.49 |
0.18 |
12.37 |
dsRNA |
1RC7 |
8!B:13!C |
G:C |
WC [cWW][XIX] |
10.52 |
56.94; 53.07 |
3.87 |
-7.6 |
0.07 |
11.04 |
dsRNA |
1RC7 |
9!B:12!C |
C:G |
WC [cWW][XIX] |
10.59 |
54.85; 54.24 |
0.61 |
-5.68 |
0.13 |
12.72 |
dsRNA |
1RC7 |
10!B:11!C |
C:G |
WC [cWW][XIX] |
10.64 |
56.19; 53.1 |
3.09 |
-2.15 |
0.2 |
6.61 |
dsRNA |
1RC7 |
21!D:40!E |
G:C |
WC [cWW][XIX] |
10.6 |
53.28; 55.71 |
2.43 |
1.7 |
0.24 |
7.25 |
dsRNA |
1RC7 |
22!D:39!E |
G:C |
WC [cWW][XIX] |
10.6 |
54.52; 58.64 |
4.12 |
-5.22 |
0.34 |
9.88 |
dsRNA |
1RC7 |
23!D:38!E |
C:G |
WC [cWW][XIX] |
10.53 |
55.82; 51.04 |
4.79 |
-6.61 |
0.0 |
10.61 |
dsRNA |
1RC7 |
24!D:37!E |
G:C |
WC [cWW][XIX] |
10.53 |
55.67; 56.4 |
0.73 |
1.49 |
0.0 |
4.94 |
dsRNA |
1RC7 |
25!D:36!E |
C:G |
WC [cWW][XIX] |
10.63 |
55.87; 56.98 |
1.11 |
-1.74 |
0.04 |
6.03 |
dsRNA |
1RC7 |
26!D:35!E |
G:C |
WC [cWW][XIX] |
10.61 |
55.39; 55.21 |
0.18 |
2.27 |
0.29 |
3.45 |
dsRNA |
1RC7 |
27!D:34!E |
C:G |
WC [cWW][XIX] |
10.5 |
57.33; 53.5 |
3.83 |
-1.6 |
0.13 |
9.77 |
dsRNA |
1RC7 |
28!D:33!E |
G:C |
WC [cWW][XIX] |
10.65 |
53.62; 55.17 |
1.55 |
-7.72 |
0.03 |
14.16 |
dsRNA |
1RC7 |
29!D:32!E |
C:G |
WC [cWW][XIX] |
10.54 |
56.28; 51.94 |
4.33 |
-11.45 |
0.42 |
17.81 |
dsRNA |
1RC7 |
30!D:31!E |
C:G |
WC [cWW][XIX] |
10.46 |
60.85; 54.34 |
6.51 |
-10.31 |
0.42 |
9.66 |