Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1RNA
BPC Identified: 14
Ambiguities: 0
| dsRNA |
1RNA |
1!A:28!B |
U:A |
WC [cWW][XX] |
10.59 |
54.3; 54.81 |
0.51 |
-25.67 |
0.06 |
28.52 |
| dsRNA |
1RNA |
2!A:27!B |
U:A |
WC [cWW][XX] |
10.32 |
59.27; 56.77 |
2.5 |
-15.2 |
0.3 |
18.08 |
| dsRNA |
1RNA |
3!A:26!B |
A:U |
WC [cWW][XX] |
10.78 |
51.24; 51.85 |
0.61 |
-15.68 |
0.1 |
17.8 |
| dsRNA |
1RNA |
4!A:25!B |
U:A |
WC [cWW][XX] |
10.35 |
58.73; 55.02 |
3.71 |
-19.0 |
0.18 |
22.47 |
| dsRNA |
1RNA |
5!A:24!B |
A:U |
WC [cWW][XX] |
10.32 |
54.97; 56.4 |
1.43 |
-16.02 |
0.21 |
17.2 |
| dsRNA |
1RNA |
6!A:23!B |
U:A |
WC [cWW][XX] |
10.43 |
56.6; 52.67 |
3.93 |
-10.91 |
0.05 |
19.4 |
| dsRNA |
1RNA |
7!A:22!B |
A:U |
WC [cWW][XX] |
10.59 |
55.17; 56.41 |
1.24 |
-14.03 |
0.01 |
18.74 |
| dsRNA |
1RNA |
8!A:21!B |
U:A |
WC [cWW][XX] |
10.82 |
49.73; 57.55 |
7.83 |
-11.6 |
0.02 |
20.47 |
| dsRNA |
1RNA |
9!A:20!B |
A:U |
WC [cWW][XX] |
10.44 |
52.52; 58.78 |
6.25 |
-12.71 |
0.04 |
23.46 |
| dsRNA |
1RNA |
10!A:19!B |
U:A |
WC [cWW][XX] |
10.53 |
53.3; 55.96 |
2.66 |
-10.82 |
0.07 |
17.31 |
| dsRNA |
1RNA |
11!A:18!B |
A:U |
WC [cWW][XX] |
10.4 |
49.81; 58.78 |
8.97 |
-11.54 |
0.16 |
16.17 |
| dsRNA |
1RNA |
12!A:17!B |
U:A |
WC [cWW][XX] |
10.77 |
53.57; 51.15 |
2.42 |
-21.55 |
0.19 |
20.91 |
| dsRNA |
1RNA |
13!A:16!B |
A:U |
WC [cWW][XX] |
10.33 |
54.3; 59.72 |
5.42 |
-16.29 |
0.08 |
23.77 |
| dsRNA |
1RNA |
14!A:15!B |
A:U |
WC [cWW][XX] |
10.76 |
54.28; 52.23 |
2.05 |
-15.94 |
0.16 |
18.86 |