Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1RPU BPC Identified: 20 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
siRNA 1RPU 1!C:19!D C:G WC [cWW][XIX] 10.95 49.88; 51.43 1.55 -10.25 0.51 12.49
siRNA 1RPU 2!C:18!D G:C WC [cWW][XIX] 10.52 55.59; 57.3 1.7 -10.04 0.28 22.71
siRNA 1RPU 3!C:17!D U:A WC [cWW][XX] 10.08 59.9; 59.28 0.62 -6.76 0.17 17.84
siRNA 1RPU 4!C:16!D A:U WC [cWW][XX] 10.77 53.18; 52.18 1.0 -6.12 0.33 14.14
siRNA 1RPU 5!C:15!D C:G WC [cWW][XIX] 10.91 51.96; 51.51 0.45 1.3 0.01 7.65
siRNA 1RPU 6!C:14D G:C WC [cWW][XIX] 10.66 54.67; 55.73 1.06 4.07 0.24 6.49
siRNA 1RPU 7!C:13!D C:G WC [cWW][XIX] 10.53 55.68; 56.03 0.35 -2.18 0.68 31.52
siRNA 1RPU 8!C:12!D G:C WC [cWW][XIX] 10.61 53.89; 56.01 2.12 -7.19 0.14 16.29
siRNA 1RPU 9!C:11!D U:A WC [cWW][XX] 10.45 56.95; 55.76 1.19 -2.75 0.37 29.05
siRNA 1RPU 10!C:10!D C:C Wb [cWW][-] 10.47 34.87; 66.59 31.72 6.98 0.81 6.96
siRNA 1RPU 11!C:9!D A:U WC [cWW][XX] 10.4 57.1; 56.17 0.93 -7.45 0.01 10.11
siRNA 1RPU 12!C:8!D C:G WC [cWW][XIX] 10.68 55.54; 55.99 0.45 -8.55 0.11 12.23
siRNA 1RPU 13!C:7!D G:C WC [cWW][XIX] 10.71 53.44; 56.08 2.63 -7.54 0.44 18.8
siRNA 1RPU 14!C:6!D C:G WC [cWW][XIX] 10.63 55.91; 55.28 0.64 -1.66 0.2 6.74
siRNA 1RPU 15!C:5!D G:C WC [cWW][XIX] 10.89 51.75; 50.64 1.11 -9.12 0.19 12.65
siRNA 1RPU 16!C:4!D U:A WC [cWW][XX] 10.52 56.14; 56.45 0.32 -10.21 0.03 13.39
siRNA 1RPU 17!C:3!D A:U WC [cWW][XX] 10.51 56.23; 56.18 0.05 -8.61 0.32 15.95
siRNA 1RPU 18!C:2!D C:G WC [cWW][XIX] 10.57 53.81; 55.68 1.87 -9.73 0.25 29.58
siRNA 1RPU 19!C:1!D G:C WC [cWW][XIX] 10.75 54.68; 54.08 0.6 -4.52 0.03 17.23
siRNA 1RPU 20!C:21!C U:U rpS(ps:O1P-O2*) [---][-] 8.72 94.02; 90.37 3.65 107.15 2.5 79.04