Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1S03 BPC Identified: 43 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
mRNA 1S03 1!A:47!A G:C WC [cWW][XIX] 11.0 46.96; 55.5 8.54 0.0 0.13 10.25
mRNA 1S03 2!A:46!A G:C WC_Mo [cWW][XIX] 10.78 59.31; 58.6 0.71 -18.0 0.72 20.1
mRNA 1S03 3!A:45!A A:U WC [cWW][XX] 10.81 55.43; 45.68 9.76 -8.68 0.16 19.26
mRNA 1S03 4!A:44!A C:G WC [cWW][XIX] 10.94 44.99; 56.96 11.97 -9.06 0.05 12.55
mRNA 1S03 5!A:43!A G:C WC [cWW][XIX] 10.92 55.87; 46.61 9.26 -7.08 0.2 22.28
mRNA 1S03 6!A:42!A A:U WC [cWW][XX] 10.26 52.02; 59.72 7.7 -6.91 0.25 12.44
mRNA 1S03 8!A:41!A G:C WC [cWW][XIX] 10.69 56.11; 52.79 3.32 -13.24 0.26 21.82
mRNA 1S03 9!A:40!A G:C WC [cWW][XIX] 11.03 53.48; 48.22 5.26 -4.39 0.01 7.29
mRNA 1S03 11!A:39!A G:C WC [cWW][XIX] 10.62 56.82; 53.19 3.63 -6.73 0.38 14.17
mRNA 1S03 12!A:38!A A:U WC [cWW][XX] 10.9 51.44; 49.89 1.55 -6.41 0.46 23.18
mRNA 1S03 13!A:14!A A:A pS [cSH][-] 6.74 149.28; 31.45 117.83 -0.76 0.07 27.48
mRNA 1S03 14!A:38!A A:U sWC [---][-] 10.33 37.84; 97.82 59.98 -5.01 0.06 23.46
mRNA 1S03 15!A:37!A C:G WC [cWW][XIX] 10.6 55.94; 52.33 3.61 -10.15 0.77 24.87
mRNA 1S03 16!A:36!A U:A WC [cWW][XX] 10.45 55.05; 55.81 0.77 -1.96 0.08 4.72
mRNA 1S03 17!A:34!A G:C WC [cWW][XIX] 10.73 51.15; 53.05 1.89 -15.57 0.1 16.61
mRNA 1S03 18!A:33!A C:G WC [cWW][XIX] 10.51 54.27; 58.23 3.96 -12.31 0.08 17.34
mRNA 1S03 19!A:32!A A:U WC [cWW][XX] 10.52 58.01; 53.76 4.25 -7.77 0.13 15.2
mRNA 1S03 20!A:31!A U:A WC [cWW][XX] 10.49 55.33; 55.92 0.59 -4.91 0.04 11.27
mRNA 1S03 21!A:30!A G:C WC [cWW][XIX] 10.55 58.76; 52.9 5.87 -5.2 0.13 13.92
mRNA 1S03 22!A:29!A A:U WC [cWW][XX] 10.26 56.41; 58.78 2.37 -6.47 0.19 10.95
mRNA 1S03 35!A:36!A A:A pS [cSH][-] 6.66 145.75; 30.79 114.96 -2.13 0.33 6.63
mRNA 1S03 1!B:47!B G:C WC [cWW][XIX] 10.6 49.38; 56.45 7.07 -6.67 0.46 13.03
mRNA 1S03 2!B:46!B G:C WC [cWW][XIX] 10.53 55.58; 59.76 4.18 -7.35 0.33 14.63
mRNA 1S03 3!B:45!B A:U WC [cWW][XX] 10.47 57.95; 55.95 2.0 -7.77 0.13 10.41
mRNA 1S03 4!B:44!B C:G WC [cWW][XIX] 11.01 49.74; 52.01 2.27 -4.05 0.32 6.04
mRNA 1S03 5!B:43!B G:C WC [cWW][XIX] 10.56 52.05; 56.4 4.35 -11.73 0.25 17.31
mRNA 1S03 6!B:42!B A:U WC [cWW][XX] 10.47 54.13; 51.11 3.03 -7.01 0.22 8.57
mRNA 1S03 8!B:41!B G:C WC [cWW][XIX] 10.6 53.8; 52.57 1.23 -10.82 0.45 19.66
mRNA 1S03 9!B:40!B G:C WC [cWW][XIX] 10.57 61.65; 53.62 8.03 -6.32 0.25 9.18
mRNA 1S03 10!B:11!B C:G rS(sp:O2*-O1P) [---][-] 9.06 176.25; 90.56 85.69 161.06 2.59 82.49
mRNA 1S03 11!B:39!B G:C WC [cWW][XIX] 10.61 57.54; 55.4 2.13 -8.4 0.38 18.05
mRNA 1S03 12!B:38!B A:U WC [cWW][XX] 10.84 52.49; 49.12 3.37 -5.99 0.39 21.54
mRNA 1S03 13!B:14!B A:A pS [cSH][-] 6.74 151.07; 32.43 118.64 -0.05 0.19 27.44
mRNA 1S03 14!B:38!B A:U sWC [---][-] 10.31 37.09; 96.93 59.85 -6.87 0.15 23.74
mRNA 1S03 15!B:37!B C:G WC [cWW][XIX] 10.56 56.02; 52.94 3.08 -10.97 0.91 30.09
mRNA 1S03 16!B:36!B U:A WC [cWW][XX] 10.48 52.12; 53.5 1.38 -1.57 0.16 2.14
mRNA 1S03 17!B:34!B G:C WC [cWW][XIX] 10.75 48.36; 51.06 2.7 -12.2 0.07 15.33
mRNA 1S03 18!B:33!B C:G WC [cWW][XIX] 10.52 55.8; 57.54 1.74 -11.13 0.01 20.09
mRNA 1S03 19!B:32!B A:U WC [cWW][XX] 10.56 57.67; 53.51 4.16 -9.33 0.21 12.57
mRNA 1S03 20!B:31!B U:A WC [cWW][XX] 10.45 54.93; 53.69 1.24 -5.5 0.08 11.38
mRNA 1S03 21!B:30!B G:C WC [cWW][XIX] 10.54 58.33; 52.2 6.13 -9.2 0.02 17.75
mRNA 1S03 22!B:29!B A:U WC [cWW][XX] 10.49 61.0; 55.59 5.42 -5.56 0.24 10.39
mRNA 1S03 35!B:36!B A:A pS [cSH][-] 6.6 147.39; 31.53 115.85 0.58 0.43 3.07