Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1T0E
BPC Identified: 16
Ambiguities: 0
| rRNA |
1T0E |
1!A:24!C |
G:C |
WC [cWW][XIX] |
10.74 |
55.27; 53.72 |
1.55 |
-5.4 |
0.01 |
13.8 |
| rRNA |
1T0E |
2!A:23!C |
G:C |
WC [cWW][XIX] |
10.5 |
57.72; 58.42 |
0.7 |
-9.42 |
0.41 |
22.22 |
| rRNA |
1T0E |
3!A:22!C |
U:A |
WC [cWW][XX] |
10.71 |
53.32; 56.63 |
3.31 |
-8.5 |
0.06 |
13.75 |
| rRNA |
1T0E |
4!A:21!C |
G:C |
WC [cWW][XIX] |
10.55 |
58.03; 57.1 |
0.93 |
-9.22 |
0.06 |
16.14 |
| rRNA |
1T0E |
5!A:20!C |
G:C |
WC [cWW][XIX] |
10.52 |
54.77; 55.62 |
0.85 |
-14.67 |
0.47 |
23.44 |
| rRNA |
1T0E |
6!A:19!C |
U:A |
WC [cWW][XX] |
10.26 |
60.97; 57.81 |
3.16 |
-14.69 |
0.24 |
19.11 |
| rRNA |
1T0E |
7!A:18!C |
G:C |
WC [cWW][XIX] |
10.54 |
55.1; 56.04 |
0.95 |
-14.0 |
0.23 |
15.96 |
| rRNA |
1T0E |
8!A:17!C |
A:A |
Wb [cWW][-] |
12.27 |
66.25; 47.2 |
19.05 |
-13.7 |
0.38 |
9.89 |
| rRNA |
1T0E |
10!A:16!C |
G:C |
WC [cWW][XIX] |
10.48 |
57.01; 55.42 |
1.59 |
-15.64 |
0.03 |
15.83 |
| rRNA |
1T0E |
11!A:15!C |
U:U |
Wb [cWW][XVI] |
8.82 |
74.22; 45.4 |
28.82 |
-14.46 |
0.25 |
14.39 |
| rRNA |
1T0E |
12!A:14!C |
C:G |
WC [cWW][XIX] |
10.39 |
61.37; 55.43 |
5.94 |
10.84 |
0.24 |
23.54 |
| rRNA |
1T0E |
13!A:13!C |
G:C |
WC [cWW][XIX] |
10.69 |
54.15; 53.73 |
0.42 |
0.36 |
0.02 |
5.32 |
| rRNA |
1T0E |
14!A:12!C |
C:G |
WC [cWW][XIX] |
10.56 |
57.08; 53.43 |
3.65 |
-7.16 |
0.01 |
14.2 |
| rRNA |
1T0E |
15!A:11!C |
U:A |
WC [cWW][XX] |
10.22 |
59.73; 57.63 |
2.1 |
-9.21 |
0.01 |
14.06 |
| rRNA |
1T0E |
16!A:10!C |
C:G |
WC [cWW][XIX] |
10.7 |
56.66; 54.13 |
2.53 |
-6.65 |
0.12 |
7.67 |
| rRNA |
1T0E |
17!A:9!C |
G:C |
WC [cWW][XIX] |
10.64 |
54.86; 54.05 |
0.82 |
-7.99 |
0.2 |
14.18 |