Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1T0K BPC Identified: 14 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
mRNA 1T0K 6!C:64!D G:C WC [cWW][XIX] 10.73 57.08; 50.72 6.35 -22.05 0.02 21.5
mRNA 1T0K 7!C:63!D A:U WC [cWW][XX] 10.45 56.78; 57.06 0.28 -8.7 0.93 21.0
mRNA 1T0K 8!C:62!D C:G WC [cWW][XIX] 10.54 55.12; 53.57 1.55 -14.24 0.02 30.34
mRNA 1T0K 9!C:61!D C:G WC [cWW][XIX] 10.51 55.1; 59.68 4.59 -16.12 0.01 15.73
mRNA 1T0K 10!C:60!D G:U S*_1 [tHS][-] 11.62 83.61; 12.81 70.81 148.44 0.16 21.97
mRNA 1T0K 11!C:59!D G:A S [tSH][XI] 10.06 83.87; 15.59 68.28 -120.22 0.07 19.43
mRNA 1T0K 12!C:58!D A:G S [tSH][XI] 9.58 2.45; 98.98 96.53 15.26 2.21 49.31
mRNA 1T0K 12!C:55!D A:A fS(sb:O2*-N1)_1 [---][-] 8.75 52.51; 101.54 49.03 135.18 1.26 46.53
mRNA 1T0K 13!C:59!D G:A rS [tSS][-] 6.94 90.75; 61.4 29.36 -154.98 1.81 65.68
mRNA 1T0K 13!C:54!D G:C WC [cWW][XIX] 10.64 59.09; 49.52 9.58 -0.98 0.58 15.79
mRNA 1T0K 14!C:53!D U:G Wb [cWW][XXVIII] 10.8 65.13; 42.02 23.11 -12.88 0.12 14.86
mRNA 1T0K 15!C:52!D G:C WC [cWW][XIX] 11.16 49.23; 41.07 8.16 -28.65 0.27 28.41
mRNA 1T0K 16!C:51!D U:A WC [cWW][XX] 11.03 49.0; 41.85 7.15 -26.76 0.01 27.38
mRNA 1T0K 17!C:50!D C:G WC [cWW][XIX] 10.41 59.0; 55.29 3.71 -9.11 0.92 20.13