Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1TFY BPC Identified: 30 Ambiguities: 1
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 1TFY 1!E:72!H G:C WC [cWW][XIX] 11.09 53.0; 54.01 1.01 -16.26 0.31 16.62
tRNA 1TFY 2!E:71!H C:G WC [cWW][XIX] 10.54 56.48; 50.97 5.51 -17.62 0.19 19.69
tRNA 1TFY 3!E:70!H G:C WC [cWW][XIX] 10.5 56.26; 62.55 6.29 -17.95 0.47 19.21
tRNA 1TFY 4!E:69!H G:C WC [cWW][XIX] 11.24 50.09; 49.2 0.89 -11.0 0.03 16.57
tRNA 1TFY 5!E:68!H A:U WC [cWW][XX] 10.84 57.49; 45.56 11.93 -6.64 0.11 19.25
tRNA 1TFY 6!E:67!H U:A WC [cWW][XX] 10.59 55.21; 46.89 8.31 -7.86 0.46 18.91
tRNA 1TFY 7!E:66!H* A:U WC [cWW][XX]; Wb* [---][-] 10.62 63.07; 49.77 13.3 -18.6 0.42 23.26
tRNA 1TFY 8!E:65!H U:A WC [cWW][XX] 10.47 57.68; 52.92 4.76 -16.72 0.25 26.17
tRNA 1TFY 9!E:64!H C:G WC [cWW][XIX] 11.51 41.48; 47.76 6.28 -15.56 0.44 13.18
tRNA 1TFY 10!E:63!H C:G WC [cWW][XIX] 10.8 48.42; 61.77 13.35 -16.24 0.22 19.78
tRNA 1TFY 11!E:62!H G:C WC [cWW][XIX] 10.79 59.6; 45.68 13.92 -15.11 0.35 39.04
tRNA 1TFY 1!F:72!I G:C WC [cWW][XIX] 10.9 54.6; 51.63 2.97 -20.84 0.73 17.34
tRNA 1TFY 2!F:71!I C:G WC [cWW][XIX] 10.62 50.18; 56.87 6.69 -17.07 0.84 14.52
tRNA 1TFY 3!F:70!I G:C Wb [---][-] 10.55 50.67; 65.02 14.35 -24.37 0.61 25.68
tRNA 1TFY 4!F:69!I G:C WC [cWW][XIX] 10.9 50.53; 55.59 5.05 -11.37 0.07 16.37
tRNA 1TFY 5!F:68!I A:U WC [cWW][XX] 10.95 54.13; 48.72 5.42 -10.36 0.26 21.71
tRNA 1TFY 6!F:67!I U:A WC [cWW][XX] 11.17 52.25; 44.92 7.33 -7.12 0.45 21.2
tRNA 1TFY 7!F:66!I A:U WC [cWW][XX] 10.52 62.18; 58.9 3.28 -16.91 0.94 16.51
tRNA 1TFY 8!F:65!I U:A Wb [---][-] 10.46 64.4; 46.96 17.43 -15.68 0.24 17.53
tRNA 1TFY 9!F:64!I C:G WC [cWW][XIX] 10.8 55.24; 54.2 1.04 -9.43 0.28 15.04
tRNA 1TFY 10!F:63!I C:G WC [cWW][XIX] 10.35 51.71; 61.48 9.77 -11.63 1.33 1.64
tRNA 1TFY 11!F:62!I G:C WC [cWW][XIX] 10.22 58.98; 54.45 4.53 -9.76 0.66 22.47
tRNA 1TFY 5!G:68!J G:C WC [cWW][XIX] 10.98 59.99; 49.29 10.7 0.98 0.83 17.24
tRNA 1TFY 6!G:67!J A:U WC [cWW][XX] 10.64 51.71; 58.42 6.71 -12.92 0.1 22.3
tRNA 1TFY 7!G:66!J U:A WC [cWW][XX] 10.81 47.55; 42.31 5.24 -7.34 0.22 15.61
tRNA 1TFY 8!G:65!J C:G WC [cWW][XIX] 10.48 61.08; 47.5 13.58 -16.17 0.21 23.85
tRNA 1TFY 9!G:64!J C:G WC [cWW][XIX] 10.79 53.95; 54.2 0.25 -11.93 0.17 14.26
tRNA 1TFY 10!G:63!J G:C WC [cWW][XIX] 10.66 51.33; 52.97 1.64 -11.03 0.15 30.67
tRNA 1TFY 11!G:62!J C:G WC [cWW][XIX] 10.53 58.21; 49.84 8.37 -8.86 0.22 17.1
tRNA 1TFY 12!G:61!J A:C WC [---][-] 10.86 44.65; 52.66 8.01 -12.41 0.41 22.16