Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1TTT BPC Identified: 103 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 1TTT 1!D:72!D G:C WC [cWW][XIX] 10.4 53.5; 55.48 1.97 -6.75 0.1 8.17
tRNA 1TTT 2!D:71!D C:G WC [cWW][XIX] 10.32 54.78; 56.77 1.99 -15.89 0.07 13.0
tRNA 1TTT 3!D:70!D G:C WC [cWW][XIX] 10.5 54.58; 53.89 0.68 -8.61 0.38 10.66
tRNA 1TTT 4!D:69!D G:U Wb [cWW][XXVIII] 9.94 43.33; 64.74 21.41 -5.23 0.03 11.41
tRNA 1TTT 5!D:68!D A:U WC [cWW][XX] 10.23 48.94; 53.72 4.78 -11.72 0.23 15.07
tRNA 1TTT 6!D:67!D U:A WC [cWW][XX] 10.27 56.69; 56.5 0.19 -16.48 0.4 20.37
tRNA 1TTT 7!D:66!D U:A WC [cWW][XX] 10.49 58.49; 59.19 0.7 -3.31 0.01 9.29
tRNA 1TTT 8!D:21!D U:A fS(sb:O2*-N1) [tSW][-] 8.21 98.51; 52.38 46.13 165.93 1.06 8.21
tRNA 1TTT 9!D:23!D A:A rS* [tHH][-] 10.45 17.29; 19.69 2.41 94.01 1.78 38.7
tRNA 1TTT 10!D:45!D G:G pS_1 [cSH][-] 8.84 46.38; 123.69 77.3 5.41 1.84 35.21
tRNA 1TTT 10!D:25!D G:C WC [cWW][XIX] 10.55 48.89; 60.57 11.68 -6.88 0.02 14.33
tRNA 1TTT 11!D:24!D C:G WC [cWW][XIX] 10.49 58.7; 54.59 4.11 0.11 0.09 18.54
tRNA 1TTT 12!D:23!D U:A WC [cWW][XX] 10.3 58.51; 48.63 9.88 17.87 0.2 49.78
tRNA 1TTT 13!D:22!D C:G WC [cWW][XIX] 10.73 52.73; 56.88 4.15 -4.11 0.71 24.16
tRNA 1TTT 15!D:48!D G:C rWb [tWW][XXII] 10.52 39.18; 55.89 16.71 172.67 0.07 6.44
tRNA 1TTT 18!D:55!D G:U fS_PSU [---][-] 8.5 27.5; 121.76 94.27 -119.79 0.78 28.44
tRNA 1TTT 19!D:56!D G:C WC [cWW][XIX] 10.41 55.88; 53.19 2.69 -2.02 0.62 14.59
tRNA 1TTT 20!D:57!D G:G fS_3 [---][-] 9.32 52.79; 106.12 53.32 -126.84 0.07 53.95
tRNA 1TTT 22!D:46!D G:G rH_1 [tWH][VII] 11.95 23.19; 35.92 12.73 -176.41 0.67 2.03
tRNA 1TTT 26!D:44!D G:A WC [cWW][VIII] 13.02 43.2; 53.58 10.38 -21.62 0.13 27.12
tRNA 1TTT 27!D:43!D C:G WC [cWW][XIX] 10.7 39.95; 60.74 20.78 -5.31 0.22 17.95
tRNA 1TTT 28!D:42!D C:G WC [cWW][XIX] 10.23 57.94; 51.44 6.5 -11.91 0.55 31.09
tRNA 1TTT 29!D:41!D A:U WC [cWW][XX] 9.23 66.6; 64.86 1.74 1.16 0.26 10.71
tRNA 1TTT 30!D:40!D G:C WC [cWW][XIX] 10.14 58.7; 52.96 5.75 -5.19 0.19 23.25
tRNA 1TTT 31!D:39!D A:U H*_PSU [---][-] 10.41 57.62; 37.08 20.54 10.58 0.51 14.15
tRNA 1TTT 32!D:38!D C:A sWb [---][-] 11.16 85.68; 27.32 58.37 6.68 0.56 22.38
tRNA 1TTT 34!D:57!E G:G pS(sb:O2*-O6) [---][-] 8.39 23.24; 143.12 119.88 115.55 2.31 71.32
tRNA 1TTT 49!D:65!D C:G WC [cWW][XIX] 10.55 52.11; 56.62 4.51 -2.8 0.28 9.83
tRNA 1TTT 50!D:64!D U:A WC [cWW][XX] 10.42 54.92; 55.72 0.8 -11.67 0.14 9.19
tRNA 1TTT 51!D:63!D G:C WC [cWW][XIX] 10.44 56.9; 52.53 4.37 -18.82 0.24 10.82
tRNA 1TTT 52!D:62!D U:A WC [cWW][XX] 10.31 55.43; 59.64 4.21 -14.66 0.21 15.13
tRNA 1TTT 53!D:61!D G:C WC [cWW][XIX] 10.47 54.79; 48.82 5.97 -7.01 0.76 20.99
tRNA 1TTT 54!D:58!D U:A rH_1 [tWH][XXIV] 9.3 35.42; 22.92 12.51 177.72 0.45 9.6
tRNA 1TTT 55!D:57!D U:G S_PSU(sb:O2*-N7) [---][-] 6.76 89.72; 39.87 49.85 -177.01 1.43 29.39
tRNA 1TTT 57!D:34!F G:G pS(sb:O2*-O6) [---][-] 8.61 144.96; 22.51 122.45 114.65 2.37 63.2
tRNA 1TTT 1!E:72!E G:C WC [cWW][XIX] 10.34 52.96; 56.22 3.26 -7.67 0.1 9.5
tRNA 1TTT 2!E:71!E C:G WC [cWW][XIX] 10.37 53.12; 55.36 2.24 -17.12 0.14 20.33
tRNA 1TTT 3!E:70!E G:C WC [cWW][XIX] 10.58 55.85; 53.92 1.93 -7.56 0.05 13.62
tRNA 1TTT 4!E:69!E G:U Wb [cWW][XXVIII] 9.92 41.9; 66.01 24.11 -8.12 0.0 14.37
tRNA 1TTT 5!E:68!E A:U WC [cWW][XX] 10.2 47.21; 55.56 8.35 -16.99 0.31 25.73
tRNA 1TTT 6!E:67!E U:A WC [cWW][XX] 10.25 54.99; 56.94 1.95 -14.73 0.08 22.27
tRNA 1TTT 7!E:66!E U:A WC [cWW][XX] 10.33 53.3; 60.29 6.99 -6.2 0.03 6.78
tRNA 1TTT 8!E:14!E U:A rH_1 [tWH][XXIV] 10.25 27.17; 23.08 4.09 -178.25 0.33 7.68
tRNA 1TTT 9!E:23!E A:A rS* [tHH][-] 10.86 11.77; 8.92 2.85 91.18 0.71 12.58
tRNA 1TTT 10!E:25!E G:C Wb [---][-] 10.77 47.52; 76.3 28.78 4.17 0.36 10.59
tRNA 1TTT 11!E:24!E C:G WC [cWW][XIX] 10.33 58.62; 52.53 6.09 -1.94 0.87 7.59
tRNA 1TTT 12!E:23!E U:A WC [cWW][XX] 11.0 48.74; 52.54 3.8 1.38 1.28 38.81
tRNA 1TTT 13!E:22!E C:G WC [cWW][XIX] 10.65 58.65; 50.32 8.33 -5.23 0.04 9.59
tRNA 1TTT 14!E:21!E A:A pfS [cSW][-] 9.29 25.61; 128.63 103.02 -18.62 0.55 20.4
tRNA 1TTT 15!E:48!E G:C rWb [tWW][XXII] 10.61 36.14; 53.56 17.42 179.42 0.08 7.72
tRNA 1TTT 18!E:55!E G:U fS_PSU [---][-] 8.58 24.67; 125.91 101.24 -117.96 0.39 24.34
tRNA 1TTT 19!E:56!E G:C WC [cWW][XIX] 10.37 48.57; 52.37 3.8 -9.34 0.05 5.57
tRNA 1TTT 20!E:57!E G:G fS_3 [---][-] 9.34 58.19; 106.81 48.61 -119.79 0.36 61.61
tRNA 1TTT 22!E:46!E G:G rH_1 [tWH][VII] 11.36 23.76; 26.3 2.54 170.86 0.51 7.62
tRNA 1TTT 26!E:44!E G:A rWb* [---][-] 12.6 42.14; 44.37 2.23 -12.21 0.44 21.96
tRNA 1TTT 27!E:43!E C:G WC [cWW][XIX] 10.27 53.58; 59.83 6.25 -16.31 0.19 13.0
tRNA 1TTT 28!E:42!E C:G WC [cWW][XIX] 10.74 41.2; 60.33 19.13 -7.46 0.05 2.15
tRNA 1TTT 30!E:40!E G:C WC [cWW][XIX] 10.27 53.3; 49.42 3.88 -17.41 0.09 21.76
tRNA 1TTT 31!E:39!E A:U WC_PSU [---][-] 11.07 51.33; 62.91 11.57 -5.9 0.07 11.18
tRNA 1TTT 33!E:35!E U:A S(sb:O2*-N7) [---][-] 6.96 72.82; 41.96 30.86 -178.2 0.27 30.7
tRNA 1TTT 34!E:57!F G:G pS(sb:O2*-O6) [---][-] 9.11 21.99; 143.82 121.83 126.18 1.59 59.31
tRNA 1TTT 49!E:65!E C:G WC [cWW][XIX] 10.61 52.6; 55.8 3.21 -7.56 0.08 6.42
tRNA 1TTT 50!E:64!E U:A WC [cWW][XX] 10.49 54.25; 55.65 1.39 -12.61 0.01 3.69
tRNA 1TTT 51!E:63!E G:C WC [cWW][XIX] 10.39 53.06; 50.76 2.3 -16.0 0.16 13.39
tRNA 1TTT 52!E:62!E U:A WC [cWW][XX] 10.34 52.51; 58.55 6.04 -14.7 0.04 15.14
tRNA 1TTT 53!E:61!E G:C WC [cWW][XIX] 10.54 54.84; 49.64 5.2 -5.11 1.01 28.24
tRNA 1TTT 54!E:58!E U:A rH_1 [tWH][XXIV] 9.41 37.39; 21.47 15.92 173.25 0.54 12.1
tRNA 1TTT 55!E:57!E U:G S_PSU(sb:O2*-N7) [---][-] 6.69 90.97; 39.81 51.16 -179.87 1.9 27.66
tRNA 1TTT 1!F:72!F G:C WC [cWW][XIX] 10.39 55.33; 53.41 1.92 -5.75 0.06 9.6
tRNA 1TTT 2!F:71!F C:G WC [cWW][XIX] 10.32 54.2; 56.04 1.84 -15.09 0.18 17.04
tRNA 1TTT 3!F:70!F G:C WC [cWW][XIX] 10.54 56.37; 51.4 4.97 -10.08 0.13 13.45
tRNA 1TTT 4!F:69!F G:U Wb [cWW][XXVIII] 9.95 43.28; 63.76 20.49 -8.62 0.05 15.19
tRNA 1TTT 5!F:68!F A:U WC [cWW][XX] 10.41 49.13; 52.9 3.77 -10.07 0.53 23.77
tRNA 1TTT 6!F:67!F U:A WC [cWW][XX] 10.15 53.8; 59.1 5.3 -16.14 0.2 19.28
tRNA 1TTT 7!F:66!F U:A WC [cWW][XX] 10.43 62.63; 63.49 0.87 -4.2 0.11 5.0
tRNA 1TTT 8!F:14!F U:A rH_1 [tWH][XXIV] 9.57 27.35; 22.72 4.62 176.7 0.25 0.34
tRNA 1TTT 9!F:23!F A:A rS* [tHH][-] 10.79 15.43; 5.51 9.91 157.77 0.52 13.22
tRNA 1TTT 10!F:45!F G:G pS_1 [cSH][-] 9.26 41.21; 112.04 70.83 -12.74 1.15 19.04
tRNA 1TTT 10!F:25!F G:C WC [cWW][XIX] 9.84 50.83; 66.67 15.84 3.87 0.56 3.25
tRNA 1TTT 11!F:24!F C:G WC [cWW][XIX] 10.27 53.65; 53.94 0.29 -7.74 0.11 19.19
tRNA 1TTT 12!F:23!F U:A WC [cWW][XX] 10.66 57.05; 52.36 4.69 0.21 0.14 8.22
tRNA 1TTT 13!F:22!F C:G WC [cWW][XIX] 11.21 49.09; 50.14 1.04 -0.16 0.29 6.91
tRNA 1TTT 15!F:48!F G:C rWb [tWW][XXII] 10.54 37.45; 53.83 16.38 172.4 0.15 9.13
tRNA 1TTT 16!F:59!F U:U rWb [tWW][XIII] 8.72 49.24; 34.07 15.17 -143.75 0.28 8.8
tRNA 1TTT 18!F:55!F G:U fS_PSU [---][-] 8.61 25.62; 124.14 98.52 -130.14 1.23 26.41
tRNA 1TTT 19!F:56!F G:C WC [cWW][XIX] 10.53 49.07; 50.85 1.78 0.38 0.05 6.26
tRNA 1TTT 20!F:57!F G:G fS_3 [---][-] 9.77 51.7; 109.04 57.35 -124.49 0.55 51.6
tRNA 1TTT 20!F:48!F G:C pfS*(bs:N4-O2*) [---][-] 9.07 154.44; 25.8 128.64 155.04 1.99 88.98
tRNA 1TTT 22!F:46!F G:G rH_1 [tWH][VII] 11.17 26.08; 25.73 0.36 168.04 0.01 13.0
tRNA 1TTT 26!F:44!F G:A Wb* [---][-] 12.96 37.05; 58.1 21.05 -4.73 0.58 21.31
tRNA 1TTT 27!F:43!F C:G WC [cWW][XIX] 10.57 56.38; 52.9 3.48 -11.7 0.94 25.9
tRNA 1TTT 28!F:42!F C:G WC [cWW][XIX] 10.75 44.24; 57.57 13.33 -8.06 0.0 10.57
tRNA 1TTT 29!F:41!F A:U WC [cWW][XX] 10.34 51.68; 60.09 8.42 -7.23 0.04 10.47
tRNA 1TTT 30!F:40!F G:C WC [cWW][XIX] 10.14 56.62; 56.98 0.37 -12.86 0.51 19.66
tRNA 1TTT 31!F:39!F A:U WC_PSU [---][-] 10.65 55.6; 70.1 14.5 -7.14 0.64 17.24
tRNA 1TTT 33!F:35!F U:A S(sb:O2*-N7) [---][-] 7.02 75.89; 45.15 30.74 -169.65 2.55 21.03
tRNA 1TTT 49!F:65!F C:G WC [cWW][XIX] 10.49 53.22; 56.99 3.77 -9.71 0.2 8.24
tRNA 1TTT 50!F:64!F U:A WC [cWW][XX] 10.38 54.46; 54.4 0.06 -6.78 0.22 1.68
tRNA 1TTT 51!F:63!F G:C WC [cWW][XIX] 10.33 58.06; 52.79 5.27 -16.48 0.08 16.51
tRNA 1TTT 52!F:62!F U:A WC [cWW][XX] 10.29 52.03; 57.83 5.79 -13.9 0.05 14.53
tRNA 1TTT 53!F:61!F G:C WC [cWW][XIX] 10.49 56.23; 50.48 5.75 -9.45 0.99 23.96
tRNA 1TTT 54!F:58!F U:A rH_1 [tWH][XXIV] 9.27 36.51; 20.55 15.95 -176.67 0.24 6.92
tRNA 1TTT 55!F:57!F U:G S_PSU(sb:O2*-N7) [---][-] 6.59 90.16; 40.75 49.4 178.08 2.17 25.8