Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1U0B BPC Identified: 33 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 1U0B 1!A:72!A G:C WC [cWW][XIX] 10.49 50.75; 56.63 5.89 -5.58 0.19 9.53
tRNA 1U0B 2!A:71!A G:C WC [cWW][XIX] 10.52 54.06; 57.68 3.62 -3.83 0.12 13.05
tRNA 1U0B 3!A:70!A C:G WC [cWW][XIX] 10.56 56.9; 53.01 3.89 -4.64 0.27 8.86
tRNA 1U0B 4!A:69!A G:C WC [cWW][XIX] 10.6 57.93; 57.59 0.34 1.58 0.02 1.74
tRNA 1U0B 5!A:68!A C:G WC [cWW][XIX] 10.65 57.48; 53.27 4.21 -3.86 0.03 8.14
tRNA 1U0B 6!A:67!A G:C WC [cWW][XIX] 10.69 52.73; 58.27 5.54 -14.0 0.29 15.96
tRNA 1U0B 7!A:66!A U:A WC [cWW][XX] 10.3 63.23; 52.88 10.35 -8.31 0.14 14.67
tRNA 1U0B 8!A:46!A U:A rpS(sb:O2*-N3) [cSS][-] 5.66 138.5; 92.52 45.98 -59.29 0.74 27.18
tRNA 1U0B 8!A:14!A U:A rH_1 [tWH][XXIV] 9.73 32.89; 20.46 12.42 150.26 0.47 15.81
tRNA 1U0B 9!A:13!A A:A rH [tWH][V] 11.66 23.05; 21.46 1.6 137.57 0.55 23.1
tRNA 1U0B 10!A:45!A A:U H_1 [cWH][XXIII] 7.51 55.89; 70.09 14.2 -2.53 0.26 21.6
tRNA 1U0B 10!A:25!A A:U WC [cWW][XX] 10.09 58.87; 58.72 0.15 -4.08 0.69 12.46
tRNA 1U0B 11!A:24!A C:G WC [cWW][XIX] 10.8 55.29; 53.53 1.75 3.14 0.22 3.36
tRNA 1U0B 12!A:23!A A:U WC [cWW][XX] 10.61 58.08; 53.1 4.97 -1.97 0.14 11.19
tRNA 1U0B 13!A:22!A A:A S [tSH][-] 9.77 90.01; 8.08 81.92 -52.79 0.02 8.42
tRNA 1U0B 15!A:48!A G:G rWb_o [---][-] 13.16 5.26; 53.38 48.12 177.16 0.34 6.05
tRNA 1U0B 16!A:59!A C:C rWC [tWW][XV] 9.34 31.99; 34.93 2.94 -158.21 1.2 38.1
tRNA 1U0B 18!A:55!A G:U fS_1 [tSW][-] 9.13 30.06; 107.51 77.46 -157.72 0.76 21.09
tRNA 1U0B 19!A:56!A G:C Wb*_Mo [---][-] 9.67 88.24; 55.74 32.5 -22.05 0.38 42.25
tRNA 1U0B 27!A:43!A G:U Wb [cWW][XXVIII] 10.23 41.22; 71.27 30.05 -7.17 0.15 17.81
tRNA 1U0B 28!A:42!A C:G WC [cWW][XIX] 10.52 55.42; 56.18 0.76 -7.95 0.44 15.62
tRNA 1U0B 29!A:41!A G:C WC [cWW][XIX] 10.41 58.24; 57.42 0.82 0.38 0.33 8.38
tRNA 1U0B 30!A:40!A G:C WC [cWW][XIX] 10.58 56.33; 51.9 4.43 -4.22 0.66 18.67
tRNA 1U0B 31!A:39!A A:U WC [cWW][XX] 10.22 57.38; 55.22 2.16 -7.95 0.34 18.11
tRNA 1U0B 32!A:38!A U:A sWC [---][-] 10.4 96.2; 32.17 64.03 -7.15 0.78 11.67
tRNA 1U0B 33!A:36!A U:A S(sb:O2*-N7) [---][-] 7.1 95.45; 34.23 61.22 -178.09 0.55 12.37
tRNA 1U0B 49!A:65!A U:A WC [cWW][XX] 10.39 52.99; 59.68 6.69 -9.47 0.19 8.43
tRNA 1U0B 50!A:64!A C:G WC [cWW][XIX] 10.58 54.33; 57.09 2.76 -9.79 0.04 12.98
tRNA 1U0B 51!A:63!A C:G WC [cWW][XIX] 10.76 61.37; 54.1 7.26 -4.28 0.03 11.64
tRNA 1U0B 52!A:62!A G:C WC [cWW][XIX] 10.6 56.34; 54.45 1.89 -1.7 0.02 9.22
tRNA 1U0B 53!A:61!A G:C WC [cWW][XIX] 10.83 61.47; 50.68 10.79 -3.16 0.53 15.94
tRNA 1U0B 54!A:58!A U:A rH_1 [tWH][XXIV] 10.65 33.68; 8.31 25.37 -161.01 0.2 7.66
tRNA 1U0B 55!A:57!A U:G S(sb:O2*-N7)_1 [---][-] 6.96 78.16; 36.45 41.72 -176.19 2.28 28.65