Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1U1Y BPC Identified: 12 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
RNA_aptamer 1U1Y 1!R:17!R C:G WC [cWW][XIX] 10.66 53.65; 56.2 2.55 -9.12 0.6 24.45
RNA_aptamer 1U1Y 2!R:16!R C:G WC [cWW][XIX] 10.66 54.61; 54.48 0.13 -12.1 0.25 19.1
RNA_aptamer 1U1Y 3!R:15!R G:C WC [cWW][XIX] 10.68 53.55; 54.83 1.28 -11.7 0.53 19.25
RNA_aptamer 1U1Y 4!R:14!R G:A WC [cWW][VIII] 12.47 50.04; 52.5 2.46 -4.14 0.34 12.93
RNA_aptamer 1U1Y 6!R:13!R G:C WC [cWW][XIX] 10.79 52.96; 53.89 0.93 -4.36 0.21 4.42
RNA_aptamer 1U1Y 7!R:12!R G:C WC [cWW][XIX] 10.58 55.44; 56.53 1.09 -1.72 0.07 4.63
RNA_aptamer 1U1Y 102!S:116!S C:G WC [cWW][XIX] 10.73 53.36; 53.26 0.1 -8.67 0.67 22.9
RNA_aptamer 1U1Y 103!S:115!S G:C WC [cWW][XIX] 11.17 53.5; 45.95 7.55 -12.01 0.59 26.36
RNA_aptamer 1U1Y 104!S:115!S G:C WC_Mo [cWW][XIX] 10.03 68.55; 65.84 2.71 -20.37 2.35 12.71
RNA_aptamer 1U1Y 104!S:114!S G:A WC [cWW][VIII] 12.58 51.85; 47.76 4.09 0.18 0.66 7.75
RNA_aptamer 1U1Y 106!S:113!S G:C WC [cWW][XIX] 10.73 54.93; 54.79 0.15 -4.34 0.27 9.16
RNA_aptamer 1U1Y 107!S:112!S G:C WC [cWW][XIX] 10.72 54.68; 54.92 0.23 5.93 0.16 7.66