Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1WZ2
BPC Identified: 72
Ambiguities: 0
tRNA |
1WZ2 |
901!C:984!C |
G:C |
WC [cWW][XIX] |
10.92 |
50.93; 54.7 |
3.77 |
1.62 |
0.11 |
9.09 |
tRNA |
1WZ2 |
902!C:983!C |
C:G |
WC [cWW][XIX] |
11.08 |
48.53; 49.31 |
0.78 |
-3.42 |
0.09 |
16.66 |
tRNA |
1WZ2 |
903!C:982!C |
G:C |
WC [cWW][XIX] |
10.19 |
60.4; 58.49 |
1.91 |
-10.61 |
0.73 |
29.43 |
tRNA |
1WZ2 |
904!C:981!C |
G:C |
WC [cWW][XIX] |
10.79 |
51.58; 53.86 |
2.28 |
13.79 |
0.23 |
17.97 |
tRNA |
1WZ2 |
905!C:980!C |
G:C |
WC [cWW][XIX] |
10.53 |
56.56; 53.88 |
2.68 |
8.09 |
0.72 |
5.56 |
tRNA |
1WZ2 |
906!C:979!C |
G:C |
WC [cWW][XIX] |
10.63 |
54.79; 53.67 |
1.12 |
-11.29 |
0.72 |
23.24 |
tRNA |
1WZ2 |
907!C:978!C |
G:C |
WC [cWW][XIX] |
11.14 |
48.64; 46.75 |
1.89 |
-20.16 |
0.2 |
20.65 |
tRNA |
1WZ2 |
908!C:924!C |
U:A |
fS(sb:O2*-N1) [tSW][-] |
8.93 |
97.75; 53.41 |
44.34 |
145.73 |
0.13 |
37.06 |
tRNA |
1WZ2 |
908!C:914!C |
U:A |
rH_1 [tWH][XXIV] |
9.33 |
32.03; 28.27 |
3.77 |
177.54 |
0.67 |
21.07 |
tRNA |
1WZ2 |
909!C:913!C |
U:G |
rH*_1 [tHW][-] |
11.52 |
30.85; 29.25 |
1.6 |
127.53 |
1.96 |
41.21 |
tRNA |
1WZ2 |
910!C:928!C |
G:C |
WC [cWW][XIX] |
10.68 |
56.68; 56.78 |
0.1 |
-4.93 |
0.52 |
16.47 |
tRNA |
1WZ2 |
911!C:927!C |
C:G |
WC [cWW][XIX] |
10.49 |
54.2; 53.3 |
0.9 |
-2.06 |
0.48 |
20.35 |
tRNA |
1WZ2 |
912!C:926!C |
C:G |
WC [cWW][XIX] |
10.56 |
55.98; 54.7 |
1.29 |
-3.97 |
0.18 |
13.59 |
tRNA |
1WZ2 |
913!C:925!C |
G:A |
S [tSH][XI] |
10.25 |
99.47; 8.88 |
90.6 |
-45.93 |
1.46 |
36.97 |
tRNA |
1WZ2 |
914!C:924!C |
A:A |
S [tSH][-] |
9.92 |
26.91; 106.18 |
79.27 |
-28.39 |
0.75 |
37.07 |
tRNA |
1WZ2 |
915!C:960!C |
G:C |
rWb [tWW][XXII] |
10.43 |
39.78; 70.44 |
30.66 |
179.06 |
0.53 |
2.05 |
tRNA |
1WZ2 |
919!C:967!C |
G:U |
fS_1 [tSW][-] |
9.18 |
19.24; 103.86 |
84.62 |
160.37 |
0.96 |
19.86 |
tRNA |
1WZ2 |
920!C:968!C |
G:C |
WC [cWW][XIX] |
10.23 |
59.9; 51.94 |
7.96 |
-34.22 |
2.04 |
61.55 |
tRNA |
1WZ2 |
923!C:958!C |
A:U |
rH_1 [tWH][XXIV] |
9.96 |
19.57; 28.89 |
9.32 |
-165.71 |
0.13 |
31.62 |
tRNA |
1WZ2 |
924!C:959!C |
A:U |
rH_1 [tWH][XXIV] |
9.57 |
29.48; 35.22 |
5.74 |
-153.97 |
0.64 |
58.91 |
tRNA |
1WZ2 |
929!C:947!C |
G:U |
WC [---][-] |
10.82 |
48.4; 54.52 |
6.11 |
2.02 |
0.31 |
6.35 |
tRNA |
1WZ2 |
930!C:946!C |
G:C |
WC [cWW][XIX] |
10.68 |
57.38; 55.53 |
1.85 |
0.93 |
0.29 |
6.52 |
tRNA |
1WZ2 |
931!C:945!C |
G:C |
WC [cWW][XIX] |
10.4 |
55.37; 59.19 |
3.82 |
3.23 |
0.1 |
10.23 |
tRNA |
1WZ2 |
932!C:944!C |
G:C |
WC [cWW][XIX] |
10.81 |
54.27; 53.32 |
0.95 |
-2.14 |
0.38 |
13.52 |
tRNA |
1WZ2 |
933!C:943!C |
G:C |
WC [cWW][XIX] |
10.9 |
55.72; 50.88 |
4.84 |
-4.46 |
0.13 |
12.95 |
tRNA |
1WZ2 |
934!C:942!C |
A:U |
WC [cWW][XX] |
11.08 |
52.68; 49.52 |
3.16 |
-4.55 |
0.05 |
11.74 |
tRNA |
1WZ2 |
948!C:957!C |
C:G |
WC [cWW][XIX] |
11.07 |
52.78; 50.21 |
2.58 |
0.51 |
0.02 |
4.39 |
tRNA |
1WZ2 |
949!C:956!C |
C:G |
WC [cWW][XIX] |
10.86 |
50.51; 53.55 |
3.03 |
0.27 |
0.24 |
10.77 |
tRNA |
1WZ2 |
950!C:955!C |
C:G |
WC [cWW][XIX] |
10.54 |
56.95; 52.94 |
4.0 |
4.99 |
0.72 |
3.88 |
tRNA |
1WZ2 |
961!C:977!C |
C:G |
WC [cWW][XIX] |
10.92 |
52.23; 52.69 |
0.45 |
-3.31 |
0.43 |
12.69 |
tRNA |
1WZ2 |
962!C:976!C |
G:C |
WC [cWW][XIX] |
10.74 |
52.22; 54.33 |
2.11 |
-8.99 |
0.7 |
21.1 |
tRNA |
1WZ2 |
963!C:975!C |
G:C |
WC [cWW][XIX] |
10.64 |
54.43; 56.8 |
2.37 |
-0.76 |
0.55 |
8.41 |
tRNA |
1WZ2 |
964!C:974!C |
G:C |
WC [cWW][XIX] |
10.7 |
54.33; 53.18 |
1.15 |
-3.36 |
0.35 |
10.64 |
tRNA |
1WZ2 |
965!C:973!C |
G:C |
WC [cWW][XIX] |
10.32 |
56.28; 60.13 |
3.85 |
-13.17 |
0.25 |
12.94 |
tRNA |
1WZ2 |
966!C:970!C |
U:A |
rH_1 [tWH][XXIV] |
10.26 |
35.77; 10.63 |
25.15 |
-178.48 |
0.68 |
6.79 |
tRNA |
1WZ2 |
901!D:984!D |
G:C |
WC [cWW][XIX] |
10.68 |
49.55; 49.24 |
0.31 |
15.52 |
1.49 |
4.6 |
tRNA |
1WZ2 |
902!D:983!D |
C:G |
WC [cWW][XIX] |
11.08 |
49.78; 49.88 |
0.1 |
-3.81 |
0.57 |
12.28 |
tRNA |
1WZ2 |
903!D:982!D |
G:C |
WC [cWW][XIX] |
10.91 |
50.93; 53.65 |
2.72 |
-13.3 |
0.09 |
16.4 |
tRNA |
1WZ2 |
904!D:981!D |
G:C |
WC [cWW][XIX] |
10.85 |
51.59; 51.06 |
0.53 |
-20.44 |
0.47 |
22.59 |
tRNA |
1WZ2 |
905!D:980!D |
G:C |
WC [cWW][XIX] |
10.57 |
53.84; 56.36 |
2.52 |
2.54 |
0.48 |
11.11 |
tRNA |
1WZ2 |
906!D:979!D |
G:C |
WC [cWW][XIX] |
10.57 |
53.18; 55.44 |
2.26 |
-16.35 |
0.31 |
27.65 |
tRNA |
1WZ2 |
907!D:978!D |
G:C |
WC [cWW][XIX] |
10.41 |
56.65; 56.54 |
0.1 |
-22.19 |
1.13 |
13.07 |
tRNA |
1WZ2 |
908!D:924!D |
U:A |
fS(sb:O2*-N1) [tSW][-] |
8.57 |
95.78; 53.39 |
42.38 |
150.85 |
0.37 |
24.32 |
tRNA |
1WZ2 |
908!D:914!D |
U:A |
rH_1 [tWH][XXIV] |
9.66 |
33.38; 19.23 |
14.15 |
169.52 |
0.09 |
7.75 |
tRNA |
1WZ2 |
910!D:928!D |
G:C |
WC [cWW][XIX] |
10.73 |
53.8; 53.36 |
0.44 |
-3.11 |
0.43 |
12.28 |
tRNA |
1WZ2 |
911!D:927!D |
C:G |
WC [cWW][XIX] |
10.58 |
56.98; 55.81 |
1.17 |
-3.43 |
0.09 |
7.93 |
tRNA |
1WZ2 |
912!D:926!D |
C:G |
WC [cWW][XIX] |
10.59 |
55.15; 56.94 |
1.79 |
-2.07 |
0.21 |
12.19 |
tRNA |
1WZ2 |
913!D:925!D |
G:A |
S [tSH][XI] |
9.62 |
91.39; 5.79 |
85.6 |
-47.96 |
0.31 |
8.66 |
tRNA |
1WZ2 |
915!D:960!D |
G:C |
rWb [tWW][XXII] |
10.1 |
35.5; 67.66 |
32.16 |
-169.5 |
0.23 |
10.41 |
tRNA |
1WZ2 |
915!D:922!D |
G:C |
fS*_2 [---][-] |
8.55 |
96.62; 17.35 |
79.27 |
172.74 |
0.49 |
22.76 |
tRNA |
1WZ2 |
919!D:967!D |
G:U |
fS_2 [---][-] |
8.94 |
34.49; 112.89 |
78.39 |
-172.72 |
1.05 |
18.55 |
tRNA |
1WZ2 |
920!D:968!D |
G:C |
WC [cWW][XIX] |
10.46 |
61.36; 49.42 |
11.94 |
-31.69 |
0.92 |
45.24 |
tRNA |
1WZ2 |
922!D:971!D |
C:A |
H_1 [---][-] |
8.33 |
69.75; 35.84 |
33.91 |
49.28 |
2.35 |
17.89 |
tRNA |
1WZ2 |
922!D:960!D |
C:C |
fS [tSW][-] |
9.79 |
83.07; 18.11 |
64.96 |
150.4 |
0.04 |
19.33 |
tRNA |
1WZ2 |
923!D:958!D |
A:U |
rH_1 [tWH][XXIV] |
9.6 |
15.86; 36.51 |
20.65 |
-170.08 |
0.46 |
16.22 |
tRNA |
1WZ2 |
924!D:959!D |
A:U |
rH_1 [tWH][XXIV] |
9.44 |
24.86; 30.45 |
5.59 |
-148.34 |
0.63 |
36.02 |
tRNA |
1WZ2 |
929!D:947!D |
G:U |
WC [---][-] |
10.69 |
46.97; 54.45 |
7.47 |
2.84 |
0.43 |
4.47 |
tRNA |
1WZ2 |
930!D:946!D |
G:C |
WC [cWW][XIX] |
10.59 |
55.19; 56.0 |
0.81 |
-6.09 |
0.19 |
12.84 |
tRNA |
1WZ2 |
931!D:945!D |
G:C |
WC [cWW][XIX] |
10.86 |
54.95; 52.4 |
2.55 |
-0.88 |
0.04 |
3.35 |
tRNA |
1WZ2 |
932!D:944!D |
G:C |
WC [cWW][XIX] |
10.71 |
55.0; 55.4 |
0.4 |
-2.2 |
0.1 |
10.52 |
tRNA |
1WZ2 |
933!D:943!D |
G:C |
WC [cWW][XIX] |
10.59 |
55.82; 54.78 |
1.04 |
5.01 |
0.11 |
17.66 |
tRNA |
1WZ2 |
934!D:942!D |
A:U |
WC [cWW][XX] |
10.58 |
55.44; 53.69 |
1.75 |
-10.22 |
0.1 |
16.85 |
tRNA |
1WZ2 |
934!D:935!D |
A:C |
S(sb:O2*-N7) [---][-] |
5.8 |
49.24; 135.84 |
86.6 |
137.72 |
1.44 |
37.94 |
tRNA |
1WZ2 |
948!D:957!D |
C:G |
WC [cWW][XIX] |
10.87 |
52.86; 54.36 |
1.5 |
-9.9 |
0.01 |
15.88 |
tRNA |
1WZ2 |
949!D:956!D |
C:G |
WC [cWW][XIX] |
10.79 |
56.16; 55.36 |
0.8 |
-5.81 |
0.09 |
13.07 |
tRNA |
1WZ2 |
950!D:955!D |
C:G |
WC [cWW][XIX] |
10.58 |
56.51; 53.62 |
2.89 |
-9.95 |
0.01 |
12.26 |
tRNA |
1WZ2 |
961!D:977!D |
C:G |
WC [cWW][XIX] |
10.82 |
51.67; 53.07 |
1.4 |
-5.29 |
0.71 |
3.68 |
tRNA |
1WZ2 |
962!D:976!D |
G:C |
WC [cWW][XIX] |
10.81 |
53.19; 53.95 |
0.77 |
3.58 |
0.27 |
6.89 |
tRNA |
1WZ2 |
963!D:975!D |
G:C |
WC [cWW][XIX] |
10.72 |
53.98; 54.41 |
0.43 |
8.71 |
0.09 |
10.24 |
tRNA |
1WZ2 |
964!D:974!D |
G:C |
WC [cWW][XIX] |
10.59 |
55.92; 56.33 |
0.41 |
-3.43 |
0.24 |
14.7 |
tRNA |
1WZ2 |
965!D:973!D |
G:C |
WC [cWW][XIX] |
10.61 |
56.35; 54.1 |
2.25 |
-10.5 |
0.29 |
23.42 |
tRNA |
1WZ2 |
966!D:970!D |
U:A |
rH_1 [tWH][XXIV] |
10.31 |
37.42; 11.78 |
25.64 |
179.83 |
0.56 |
12.37 |