Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1XP7
BPC Identified: 20
Ambiguities: 0
vRNA |
1XP7 |
1!A:23!A |
C:G |
WC [cWW][XIX] |
10.57 |
52.5; 54.93 |
2.43 |
-12.83 |
0.38 |
18.34 |
vRNA |
1XP7 |
2!A:22!A |
U:A |
WC [cWW][XX] |
10.31 |
54.2; 57.35 |
3.14 |
-14.61 |
0.13 |
17.3 |
vRNA |
1XP7 |
3!A:21!A |
U:A |
WC [cWW][XX] |
10.54 |
52.82; 53.51 |
0.69 |
-9.93 |
0.31 |
15.59 |
vRNA |
1XP7 |
4!A:20!A |
G:C |
WC [cWW][XIX] |
10.46 |
54.02; 52.81 |
1.21 |
-7.66 |
0.1 |
15.61 |
vRNA |
1XP7 |
5!A:19!A |
C:G |
WC [cWW][XIX] |
10.47 |
55.72; 54.7 |
1.01 |
-6.01 |
0.27 |
14.26 |
vRNA |
1XP7 |
6!A:18!A |
U:A |
WC [cWW][XX] |
10.02 |
57.47; 57.87 |
0.4 |
-10.53 |
0.27 |
14.82 |
vRNA |
1XP7 |
7!A:17!A |
G:C |
WC [cWW][XIX] |
10.44 |
55.52; 57.06 |
1.54 |
1.72 |
0.19 |
7.94 |
vRNA |
1XP7 |
10!A:15!B |
G:C |
WC [cWW][XIX] |
10.39 |
53.56; 60.67 |
7.1 |
-10.34 |
0.61 |
22.28 |
vRNA |
1XP7 |
11!A:14!B |
U:A |
WC [cWW][XX] |
10.39 |
53.68; 57.37 |
3.68 |
-7.95 |
0.24 |
12.51 |
vRNA |
1XP7 |
12!A:13!B |
G:C |
WC [cWW][XIX] |
10.63 |
54.02; 53.81 |
0.21 |
-6.41 |
0.12 |
11.28 |
vRNA |
1XP7 |
13!A:12!B |
C:G |
WC [cWW][XIX] |
10.51 |
53.79; 53.5 |
0.29 |
-6.51 |
0.05 |
7.44 |
vRNA |
1XP7 |
14!A:11!B |
A:U |
WC [cWW][XX] |
10.07 |
55.79; 56.49 |
0.7 |
-12.22 |
0.29 |
18.32 |
vRNA |
1XP7 |
15!A:10!B |
C:G |
WC [cWW][XIX] |
10.38 |
59.68; 54.14 |
5.54 |
-5.53 |
0.59 |
23.58 |
vRNA |
1XP7 |
1!B:23!B |
C:G |
WC [cWW][XIX] |
10.6 |
51.57; 54.78 |
3.22 |
-9.7 |
0.32 |
16.25 |
vRNA |
1XP7 |
2!B:22!B |
U:A |
WC [cWW][XX] |
10.32 |
55.1; 57.2 |
2.1 |
-12.64 |
0.07 |
16.71 |
vRNA |
1XP7 |
3!B:21!B |
U:A |
WC [cWW][XX] |
10.19 |
56.1; 61.34 |
5.24 |
-8.92 |
0.08 |
13.16 |
vRNA |
1XP7 |
4!B:20!B |
G:C |
WC [cWW][XIX] |
10.41 |
55.57; 58.44 |
2.86 |
-6.69 |
0.13 |
12.9 |
vRNA |
1XP7 |
5!B:19!B |
C:G |
WC [cWW][XIX] |
10.43 |
57.25; 55.41 |
1.83 |
-8.3 |
0.05 |
14.34 |
vRNA |
1XP7 |
6!B:18!B |
U:A |
WC [cWW][XX] |
10.03 |
60.8; 57.52 |
3.28 |
-9.88 |
0.2 |
15.79 |
vRNA |
1XP7 |
7!B:17!B |
G:C |
WC [cWW][XIX] |
10.52 |
56.12; 54.71 |
1.42 |
0.41 |
0.17 |
6.2 |