Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1Y26 BPC Identified: 36 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswitch 1Y26 13!X:83!X C:G WC [cWW][XIX] 11.1 44.41; 52.0 7.59 -1.49 0.09 1.07
Riboswitch 1Y26 14!X:82!X G:U Wb [cWW][XXVIII] 10.53 48.22; 61.48 13.26 -12.43 0.48 13.7
Riboswitch 1Y26 15!X:81!X C:G WC [cWW][XIX] 10.9 51.19; 54.05 2.85 -8.92 0.36 17.44
Riboswitch 1Y26 16!X:80!X U:A WC [cWW][XX] 10.69 52.38; 53.43 1.05 -8.84 0.09 12.11
Riboswitch 1Y26 17!X:79!X U:A WC [cWW][XX] 11.22 43.93; 54.18 10.26 -6.81 0.0 10.25
Riboswitch 1Y26 18!X:78!X C:G WC [cWW][XIX] 10.39 58.12; 57.71 0.42 -13.9 0.53 13.58
Riboswitch 1Y26 19!X:77!X A:U WC [cWW][XX] 10.44 55.31; 57.48 2.17 -10.49 0.01 14.8
Riboswitch 1Y26 20!X:76!X U:A WC [cWW][XX] 10.13 57.37; 61.52 4.15 -13.43 0.37 16.36
Riboswitch 1Y26 21!X:75!X A:U WC [cWW][XX] 10.28 55.96; 55.61 0.35 -7.97 0.19 13.13
Riboswitch 1Y26 22!X:52!X U:A WC [cWW][XX] 10.51 51.34; 59.16 7.82 4.2 0.61 18.04
Riboswitch 1Y26 23!X:46!X A:G fS [tSW][X] 9.43 1.35; 116.74 115.39 38.18 0.16 8.32
Riboswitch 1Y26 24!X:53!X A:C rpS(ss:O2*-O2*)_1 [cSS][-] 5.4 148.35; 138.66 9.69 -129.17 1.59 31.01
Riboswitch 1Y26 25!X:45!X U:A WC [cWW][XX] 10.69 51.94; 52.13 0.19 -5.28 0.02 5.84
Riboswitch 1Y26 26!X:44!X C:G WC [cWW][XIX] 10.72 56.01; 54.47 1.55 -5.65 0.39 13.08
Riboswitch 1Y26 27!X:43!X C:G WC [cWW][XIX] 10.69 55.13; 51.5 3.63 -2.2 0.06 8.89
Riboswitch 1Y26 28!X:42!X U:G Wb [cWW][XXVIII] 10.39 65.66; 41.18 24.48 -6.07 0.03 8.51
Riboswitch 1Y26 29!X:41!X A:U WC [cWW][XX] 10.32 55.65; 58.27 2.62 -4.87 0.21 7.58
Riboswitch 1Y26 30!X:40!X A:U WC [cWW][XX] 9.97 58.82; 59.33 0.51 -10.89 0.59 18.87
Riboswitch 1Y26 31!X:39!X U:U Wb [cWW][XVI] 8.48 74.27; 42.92 31.35 -16.4 0.4 22.15
Riboswitch 1Y26 33!X:66!X A:A rH [tWH][V] 12.37 14.86; 22.11 7.26 163.05 0.17 4.69
Riboswitch 1Y26 33!X:37!X A:G rpS(sb:O2*-N3) [---][-] 5.68 92.91; 162.05 69.14 -19.29 1.61 20.63
Riboswitch 1Y26 34!X:65!X U:A rH_1 [tWH][XXIV] 9.52 27.03; 22.47 4.56 179.7 0.09 10.46
Riboswitch 1Y26 34!X:37!X U:G rpS [cSS][-] 4.21 125.43; 109.76 15.67 113.82 0.82 30.53
Riboswitch 1Y26 37!X:61!X G:C WC [cWW][XIX] 11.07 54.64; 48.84 5.8 -16.48 0.04 15.17
Riboswitch 1Y26 38!X:66!X G:A fS [tSW][X] 9.25 116.82; 21.7 95.12 -90.09 0.44 28.12
Riboswitch 1Y26 38!X:60!X G:C WC [cWW][XIX] 10.9 54.0; 51.49 2.51 -9.43 0.43 20.44
Riboswitch 1Y26 46!X:53!X G:C WC [cWW][XIX] 10.72 52.03; 52.12 0.09 6.47 0.42 13.21
Riboswitch 1Y26 49!X:76!X U:A pfS* [cWS][-] 5.99 61.16; 132.98 71.82 29.7 1.41 34.02
Riboswitch 1Y26 50!X:75!X C:U pfS [cSW][-] 7.91 33.27; 132.87 99.61 -33.16 0.97 22.84
Riboswitch 1Y26 54!X:72!X C:G WC [cWW][XIX] 10.83 49.12; 51.67 2.55 -6.38 0.51 16.85
Riboswitch 1Y26 55!X:71!X A:U WC [cWW][XX] 10.53 57.71; 54.7 3.01 -8.08 0.34 12.07
Riboswitch 1Y26 56!X:70!X A:U WC [cWW][XX] 10.91 53.66; 51.33 2.33 -11.96 0.01 12.96
Riboswitch 1Y26 57!X:69!X G:C WC [cWW][XIX] 10.87 51.85; 53.24 1.39 -9.21 0.25 15.34
Riboswitch 1Y26 58!X:68!X A:U WC [cWW][XX] 10.88 56.08; 50.55 5.53 -11.43 0.1 17.74
Riboswitch 1Y26 59!X:67!X G:C WC [cWW][XIX] 10.44 60.55; 54.0 6.55 -13.49 0.43 28.26
Riboswitch 1Y26 61!X:65!X C:A pfS [cSW][-] 9.0 122.62; 43.06 79.55 13.0 0.56 12.69