Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1Y27 BPC Identified: 37 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswitch 1Y27 15!X:81!X G:C WC [cWW][XIX] 10.79 53.47; 50.49 2.99 4.96 0.27 5.05
Riboswitch 1Y27 16!X:80!X A:U WC [cWW][XX] 10.57 55.22; 55.37 0.15 -12.02 0.07 19.56
Riboswitch 1Y27 17!X:79!X U:G Wb [cWW][XXVIII] 10.59 66.92; 41.89 25.03 -10.47 0.42 14.29
Riboswitch 1Y27 18!X:78!X C:G WC [cWW][XIX] 10.72 51.75; 53.77 2.02 -6.55 0.01 11.09
Riboswitch 1Y27 19!X:77!X A:U WC [cWW][XX] 10.64 53.92; 51.88 2.04 -9.36 0.15 26.99
Riboswitch 1Y27 20!X:76!X U:A WC [cWW][XX] 10.49 54.3; 52.36 1.94 -13.59 0.08 19.73
Riboswitch 1Y27 21!X:75!X A:U WC [cWW][XX] 10.58 54.78; 53.26 1.52 -9.95 0.06 15.22
Riboswitch 1Y27 22!X:52!X U:A WC [cWW][XX] 10.4 54.6; 56.02 1.42 1.12 0.68 19.73
Riboswitch 1Y27 23!X:46!X A:G fS [tSW][X] 9.56 1.29; 117.84 116.55 146.01 0.48 5.98
Riboswitch 1Y27 24!X:53!X A:C rpS(ss:O2*-O2*)_1 [cSS][-] 5.4 146.87; 137.05 9.82 -123.34 2.05 34.72
Riboswitch 1Y27 25!X:45!X U:A WC [cWW][XX] 10.55 53.0; 59.27 6.27 -7.87 0.23 12.79
Riboswitch 1Y27 26!X:44!X C:A Wb [cWW][-] 10.32 66.48; 47.3 19.18 -9.31 0.31 14.86
Riboswitch 1Y27 27!X:43!X G:C WC [cWW][XIX] 10.67 60.96; 56.45 4.51 -10.99 0.26 17.39
Riboswitch 1Y27 28!X:42!X C:G WC [cWW][XIX] 10.76 52.43; 51.47 0.96 -11.65 0.02 15.97
Riboswitch 1Y27 29!X:41!X G:C WC [cWW][XIX] 10.82 59.66; 45.14 14.52 -8.26 0.33 16.33
Riboswitch 1Y27 30!X:40!X U:A WC [cWW][XX] 10.58 57.08; 55.54 1.54 -9.62 0.17 11.91
Riboswitch 1Y27 31!X:39!X G:C WC [cWW][XIX] 10.52 62.79; 52.64 10.14 -5.57 0.37 11.93
Riboswitch 1Y27 33!X:66!X A:A rH [tWH][V] 12.48 23.37; 19.74 3.63 162.19 0.13 5.96
Riboswitch 1Y27 33!X:37!X A:G rpS(sb:O2*-N3) [---][-] 5.53 103.25; 154.83 51.58 -16.52 2.44 17.75
Riboswitch 1Y27 34!X:65!X U:A rH_1 [tWH][XXIV] 9.82 28.5; 22.41 6.09 -179.02 0.06 11.66
Riboswitch 1Y27 34!X:37!X U:G rpS [cSS][-] 4.25 125.63; 104.8 20.83 112.27 0.64 31.53
Riboswitch 1Y27 35!X:64!X A:A rH [tWH][V] 12.22 23.84; 22.87 0.97 -170.82 0.45 5.1
Riboswitch 1Y27 37!X:61!X G:C WC [cWW][XIX] 10.75 48.39; 51.28 2.89 -12.31 0.36 11.58
Riboswitch 1Y27 38!X:66!X G:A fS [tSW][X] 9.38 120.4; 20.74 99.66 -102.16 0.32 29.19
Riboswitch 1Y27 38!X:60!X G:C WC [cWW][XIX] 10.74 55.48; 49.33 6.15 -10.74 0.1 18.37
Riboswitch 1Y27 46!X:53!X G:C WC [cWW][XIX] 10.79 52.51; 52.41 0.11 3.61 0.63 16.37
Riboswitch 1Y27 49!X:76!X U:A pfS* [cWS][-] 6.09 65.2; 126.06 60.86 20.34 1.03 31.06
Riboswitch 1Y27 50!X:75!X C:U pfS [cSW][-] 7.9 35.01; 130.7 95.69 -32.24 1.39 27.2
Riboswitch 1Y27 54!X:72!X C:G WC [cWW][XIX] 10.53 59.09; 54.1 5.0 -10.87 0.41 18.44
Riboswitch 1Y27 55!X:71!X G:C WC [cWW][XIX] 10.76 51.42; 51.33 0.09 -10.19 0.12 11.17
Riboswitch 1Y27 56!X:70!X G:C WC [cWW][XIX] 10.71 52.8; 53.35 0.55 -11.09 0.26 16.24
Riboswitch 1Y27 57!X:69!X G:U Wb [cWW][XXVIII] 10.47 42.42; 64.85 22.43 -7.73 0.35 11.16
Riboswitch 1Y27 58!X:68!X C:G WC [cWW][XIX] 10.86 51.8; 54.1 2.31 -8.23 0.42 15.52
Riboswitch 1Y27 59!X:67!X A:U WC [cWW][XX] 10.52 57.9; 54.84 3.06 -4.15 0.03 6.13
Riboswitch 1Y27 60!X:67!X C:U pfS*_1 [cWS][-] 7.58 93.72; 67.77 25.96 -15.91 2.3 11.24
Riboswitch 1Y27 61!X:65!X C:A pfS [cSW][-] 9.24 129.01; 38.13 90.88 20.22 0.08 16.69
Riboswitch 1Y27 62!X:63!X G:U pS* [cHS][-] 6.31 139.44; 57.75 81.7 13.92 0.4 12.38