Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1Y73
BPC Identified: 22
Ambiguities: 0
vRNA |
1Y73 |
1!A:23!B |
C:G |
WC [cWW][XIX] |
10.64 |
53.55; 54.73 |
1.18 |
-11.55 |
0.02 |
14.53 |
vRNA |
1Y73 |
2!A:22!B |
U:A |
WC [cWW][XX] |
10.22 |
56.52; 58.66 |
2.14 |
-11.1 |
0.19 |
22.47 |
vRNA |
1Y73 |
3!A:21!B |
U:A |
WC [cWW][XX] |
10.15 |
58.54; 58.74 |
0.2 |
-0.37 |
0.08 |
7.01 |
vRNA |
1Y73 |
4!A:20!B |
G:C |
WC [cWW][XIX] |
10.67 |
56.97; 57.47 |
0.5 |
-8.49 |
0.07 |
15.13 |
vRNA |
1Y73 |
5!A:19!B |
C:G |
WC [cWW][XIX] |
10.63 |
55.42; 53.65 |
1.77 |
-11.01 |
0.21 |
15.71 |
vRNA |
1Y73 |
6!A:18!B |
U:A |
WC [cWW][XX] |
10.41 |
55.73; 55.54 |
0.2 |
-8.95 |
0.15 |
12.84 |
vRNA |
1Y73 |
7!A:17!B |
G:C |
WC [cWW][XIX] |
10.32 |
57.23; 54.46 |
2.77 |
-5.13 |
0.11 |
14.83 |
vRNA |
1Y73 |
9!A:16!B |
G:A |
WC [cWW][VIII] |
12.22 |
54.15; 54.62 |
0.47 |
-4.63 |
0.29 |
26.57 |
vRNA |
1Y73 |
10!A:15!B |
G:C |
WC [cWW][XIX] |
10.41 |
54.28; 55.72 |
1.45 |
-7.9 |
0.42 |
14.26 |
vRNA |
1Y73 |
11!A:14!B |
U:A |
WC [cWW][XX] |
10.3 |
57.98; 55.29 |
2.7 |
-5.94 |
0.06 |
9.96 |
vRNA |
1Y73 |
12!A:13!B |
G:C |
WC [cWW][XIX] |
10.42 |
53.89; 59.39 |
5.5 |
-6.15 |
0.18 |
10.66 |
vRNA |
1Y73 |
13!A:12!B |
C:G |
WC [cWW][XIX] |
10.41 |
58.43; 55.18 |
3.25 |
-6.41 |
0.01 |
8.49 |
vRNA |
1Y73 |
14!A:11!B |
A:U |
WC [cWW][XX] |
10.26 |
56.23; 55.71 |
0.52 |
-5.33 |
0.42 |
11.91 |
vRNA |
1Y73 |
15!A:10!B |
C:G |
WC [cWW][XIX] |
10.8 |
51.89; 54.09 |
2.2 |
-13.39 |
0.19 |
13.95 |
vRNA |
1Y73 |
16!A:9!B |
A:G |
WC [cWW][VIII] |
12.43 |
48.59; 56.59 |
8.0 |
-4.41 |
0.22 |
17.19 |
vRNA |
1Y73 |
17!A:7!B |
C:G |
WC [cWW][XIX] |
10.66 |
54.67; 51.05 |
3.62 |
0.45 |
0.04 |
3.58 |
vRNA |
1Y73 |
18!A:6!B |
A:U |
WC [cWW][XX] |
10.41 |
53.29; 56.36 |
3.06 |
-8.95 |
0.02 |
13.27 |
vRNA |
1Y73 |
19!A:5!B |
G:C |
WC [cWW][XIX] |
10.42 |
53.33; 53.87 |
0.54 |
-9.9 |
0.4 |
18.58 |
vRNA |
1Y73 |
20!A:4!B |
C:G |
WC [cWW][XIX] |
10.58 |
58.17; 55.09 |
3.08 |
-9.77 |
0.16 |
17.29 |
vRNA |
1Y73 |
21!A:3!B |
A:U |
WC [cWW][XX] |
10.0 |
58.83; 60.6 |
1.77 |
-8.07 |
0.01 |
12.92 |
vRNA |
1Y73 |
22!A:2!B |
A:U |
WC [cWW][XX] |
10.24 |
55.09; 56.29 |
1.21 |
-9.1 |
0.37 |
15.11 |
vRNA |
1Y73 |
23!A:1!B |
G:C |
WC [cWW][XIX] |
10.49 |
54.68; 56.42 |
1.74 |
-8.77 |
0.11 |
15.55 |