Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1Y99 BPC Identified: 22 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
vRNA 1Y99 1!A:23!B C:G WC [cWW][XIX] 10.62 52.34; 54.73 2.39 -17.21 0.4 26.03
vRNA 1Y99 2!A:22!B U:A WC [cWW][XX] 10.22 53.57; 57.22 3.65 -13.81 0.41 13.79
vRNA 1Y99 3!A:21!B U:A WC [cWW][XX] 10.47 53.43; 56.45 3.02 -8.57 0.21 10.99
vRNA 1Y99 4!A:20!B G:C WC [cWW][XIX] 10.41 52.97; 59.99 7.01 -8.93 0.12 13.74
vRNA 1Y99 5!A:19!B C:G WC [cWW][XIX] 10.49 56.3; 55.7 0.6 -10.47 0.16 14.74
vRNA 1Y99 6!A:18!B U:A WC [cWW][XX] 10.26 57.9; 55.07 2.84 -9.44 0.17 11.34
vRNA 1Y99 7!A:17!B G:C WC [cWW][XIX] 10.42 56.23; 54.65 1.59 -6.92 0.15 15.92
vRNA 1Y99 9!A:16!B G:A WC [cWW][VIII] 12.43 50.34; 52.12 1.78 -5.65 0.15 24.72
vRNA 1Y99 10!A:15!B G:C WC [cWW][XIX] 10.64 51.9; 54.05 2.15 -9.79 0.01 11.33
vRNA 1Y99 11!A:14!B U:A WC [cWW][XX] 10.57 55.19; 52.34 2.86 -7.96 0.02 11.02
vRNA 1Y99 12!A:13!B G:C WC [cWW][XIX] 10.48 56.65; 56.46 0.19 -7.39 0.14 17.21
vRNA 1Y99 13!A:12!B C:G WC [cWW][XIX] 10.46 55.7; 54.53 1.17 -6.3 0.03 10.85
vRNA 1Y99 14!A:11!B A:U WC [cWW][XX] 10.35 56.08; 54.77 1.31 -6.82 0.04 12.1
vRNA 1Y99 15!A:10!B C:G WC [cWW][XIX] 10.56 56.36; 52.25 4.11 -10.81 0.15 13.38
vRNA 1Y99 16!A:9!B A:G WC [cWW][VIII] 12.25 55.49; 53.35 2.14 -11.7 0.01 29.06
vRNA 1Y99 17!A:7!B C:G WC [cWW][XIX] 10.41 54.38; 55.71 1.33 -3.88 0.04 9.96
vRNA 1Y99 18!A:6!B A:U WC [cWW][XX] 10.18 56.05; 58.0 1.95 -11.79 0.18 18.08
vRNA 1Y99 19!A:5!B G:C WC [cWW][XIX] 10.58 52.1; 55.67 3.57 -9.35 0.03 15.83
vRNA 1Y99 20!A:4!B C:G WC [cWW][XIX] 10.53 57.24; 53.61 3.63 -6.71 0.15 16.7
vRNA 1Y99 21!A:3!B A:U WC [cWW][XX] 10.53 56.0; 55.34 0.66 -9.68 0.1 13.31
vRNA 1Y99 22!A:2!B A:U WC [cWW][XX] 10.66 56.43; 50.73 5.7 -13.92 0.03 17.66
vRNA 1Y99 23!A:1!B G:C WC [cWW][XIX] 10.82 50.65; 54.49 3.84 -15.83 0.39 23.94