Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1YFG BPC Identified: 31 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 1YFG 1!A:72!A A:U WC [cWW][XX] 10.64 56.15; 52.52 3.63 -12.71 0.13 19.06
tRNA 1YFG 2!A:71!A G:C WC [cWW][XIX] 10.83 53.08; 50.24 2.84 -19.2 0.28 26.72
tRNA 1YFG 3!A:70!A C:G WC [cWW][XIX] 10.48 57.74; 51.99 5.75 -12.44 0.07 14.99
tRNA 1YFG 4!A:69!A G:C WC [cWW][XIX] 10.74 53.48; 51.23 2.25 -8.51 0.13 8.13
tRNA 1YFG 5!A:68!A C:G WC [cWW][XIX] 10.61 54.32; 51.81 2.51 -8.47 0.13 11.08
tRNA 1YFG 6!A:67!A C:G WC [cWW][XIX] 10.68 53.79; 54.42 0.63 -14.33 0.39 14.49
tRNA 1YFG 7!A:66!A G:C WC [cWW][XIX] 10.54 51.62; 56.42 4.8 -9.83 0.6 6.64
tRNA 1YFG 8!A:14!A U:A rH_1 [tWH][XXIV] 9.64 33.22; 21.93 11.29 178.55 0.5 22.25
tRNA 1YFG 9!A:23!A G:C rS*_1 [tHH][-] 11.46 19.67; 9.64 10.04 -179.35 0.27 6.86
tRNA 1YFG 10!A:25!A G:C WC [cWW][XIX] 10.76 55.48; 50.09 5.39 -12.8 0.29 18.24
tRNA 1YFG 11!A:24!A C:G WC [cWW][XIX] 10.82 48.91; 53.78 4.87 -11.55 0.18 18.93
tRNA 1YFG 12!A:23!A G:C WC [cWW][XIX] 10.92 51.12; 49.83 1.29 -10.83 0.44 16.55
tRNA 1YFG 13!A:22!A C:G WC [cWW][XIX] 10.48 57.23; 49.87 7.36 -7.15 0.27 10.51
tRNA 1YFG 15!A:48!A G:C rWb [tWW][XXII] 10.59 34.67; 59.34 24.68 -172.88 0.14 3.56
tRNA 1YFG 18!A:55!A G:U fS_1 [tSW][-] 9.2 26.21; 101.89 75.68 -141.53 0.3 17.98
tRNA 1YFG 19!A:56!A G:C WC [cWW][XIX] 10.69 55.23; 48.47 6.75 -14.11 0.45 13.9
tRNA 1YFG 20!A:60!A A:A pS [cSH][-] 8.85 104.71; 2.99 101.72 -42.81 0.13 69.33
tRNA 1YFG 22!A:46!A G:G rH_1 [tWH][VII] 11.27 31.55; 26.46 5.09 -169.16 0.21 9.34
tRNA 1YFG 26!A:44!A G:A WC [cWW][VIII] 12.77 35.98; 48.35 12.37 -8.37 0.2 26.2
tRNA 1YFG 27!A:43!A C:G WC [cWW][XIX] 10.83 53.37; 48.12 5.25 -5.8 0.56 14.66
tRNA 1YFG 28!A:42!A A:U WC [cWW][XX] 10.39 55.14; 57.8 2.66 -15.64 0.18 27.53
tRNA 1YFG 29!A:41!A G:C WC [cWW][XIX] 10.47 51.67; 58.77 7.1 -12.33 0.29 20.55
tRNA 1YFG 30!A:40!A G:C WC [cWW][XIX] 11.17 48.0; 44.52 3.48 1.48 0.04 5.32
tRNA 1YFG 31!A:39!A G:C WC [cWW][XIX] 10.69 61.45; 49.98 11.47 -1.34 0.16 6.42
tRNA 1YFG 32!A:38!A C:A rH* [---][-] 12.5 13.46; 53.11 39.65 5.14 0.16 28.93
tRNA 1YFG 49!A:65!A C:G WC [cWW][XIX] 10.87 47.57; 49.9 2.33 -15.36 0.35 13.93
tRNA 1YFG 50!A:64!A U:A WC [cWW][XX] 11.07 64.91; 66.85 1.94 9.89 0.56 9.07
tRNA 1YFG 51!A:63!A C:G WC [cWW][XIX] 10.68 53.97; 50.84 3.13 -3.22 0.26 7.1
tRNA 1YFG 52!A:62!A G:C WC [cWW][XIX] 10.63 53.04; 53.06 0.01 -7.91 0.07 12.08
tRNA 1YFG 53!A:61!A G:C WC [cWW][XIX] 10.76 53.06; 49.44 3.61 -6.16 0.41 15.21
tRNA 1YFG 54!A:58!A A:A rH [tWH][V] 12.14 16.49; 24.86 8.37 -142.28 0.13 13.88