Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1ZBH
BPC Identified: 11
Ambiguities: 0
| mRNA |
1ZBH |
7!F:20!F |
G:C |
WC [cWW][XIX] |
10.76 |
51.85; 55.54 |
3.68 |
-7.79 |
0.02 |
14.59 |
| mRNA |
1ZBH |
8!F:19!F |
C:G |
WC [cWW][XIX] |
10.83 |
56.77; 51.35 |
5.42 |
-9.36 |
0.11 |
25.7 |
| mRNA |
1ZBH |
9!F:18!F |
U:A |
WC [cWW][XX] |
10.54 |
59.14; 56.58 |
2.57 |
-2.71 |
0.08 |
4.92 |
| mRNA |
1ZBH |
10!F:17!F |
C:G |
WC [cWW][XIX] |
10.68 |
52.07; 58.31 |
6.24 |
-6.03 |
0.42 |
14.34 |
| mRNA |
1ZBH |
11!F:16!F |
U:A |
WC [cWW][XX] |
10.31 |
62.44; 58.65 |
3.79 |
-1.13 |
0.05 |
12.93 |
| mRNA |
1ZBH |
6!E:21!E |
G:C |
WC_mo [cWW][XIX] |
11.99 |
42.23; 39.81 |
2.43 |
13.07 |
1.24 |
6.8 |
| mRNA |
1ZBH |
7!E:20!E |
G:C |
WC [cWW][XIX] |
10.85 |
54.09; 57.87 |
3.78 |
-6.92 |
0.14 |
12.51 |
| mRNA |
1ZBH |
8!E:19!E |
C:G |
WC [cWW][XIX] |
10.55 |
56.66; 50.65 |
6.01 |
-9.2 |
0.14 |
21.02 |
| mRNA |
1ZBH |
9!E:18!E |
U:A |
WC [cWW][XX] |
10.57 |
57.53; 55.25 |
2.28 |
-3.76 |
0.19 |
3.35 |
| mRNA |
1ZBH |
10!E:17!E |
C:G |
WC [cWW][XIX] |
10.69 |
54.16; 54.23 |
0.07 |
0.72 |
0.1 |
20.44 |
| mRNA |
1ZBH |
11!E:16!E |
U:A |
WC [cWW][XX] |
10.2 |
65.48; 62.12 |
3.36 |
1.58 |
0.27 |
4.8 |