Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1ZDI
BPC Identified: 9
Ambiguities: 0
| vRNA |
1ZDI |
3!R:17!R |
A:U |
WC [cWW][XX] |
10.1 |
53.98; 57.37 |
3.39 |
-20.43 |
0.09 |
22.27 |
| vRNA |
1ZDI |
4!R:16!R |
U:A |
WC [cWW][XX] |
10.24 |
54.16; 59.48 |
5.33 |
-9.7 |
0.03 |
13.99 |
| vRNA |
1ZDI |
5!R:15!R |
G:C |
WC [cWW][XIX] |
10.37 |
51.51; 57.68 |
6.18 |
-2.78 |
0.48 |
14.41 |
| vRNA |
1ZDI |
7!R:14!R |
G:C |
WC [cWW][XIX] |
10.34 |
47.79; 57.74 |
9.95 |
-4.02 |
0.03 |
9.98 |
| vRNA |
1ZDI |
8!R:13!R |
G:C |
WC [cWW][XIX] |
10.55 |
52.21; 58.35 |
6.14 |
0.92 |
0.22 |
7.4 |
| vRNA |
1ZDI |
4!S:16!S |
U:A |
WC [cWW][XX] |
10.35 |
52.43; 54.67 |
2.23 |
-3.91 |
0.43 |
15.72 |
| vRNA |
1ZDI |
5!S:15!S |
G:C |
WC [cWW][XIX] |
10.51 |
50.21; 55.04 |
4.83 |
-3.6 |
0.25 |
13.26 |
| vRNA |
1ZDI |
7!S:14!S |
G:C |
WC [cWW][XIX] |
10.86 |
52.26; 59.12 |
6.87 |
3.96 |
0.23 |
18.17 |
| vRNA |
1ZDI |
8!S:13!S |
G:C |
WC [cWW][XIX] |
10.23 |
52.33; 55.0 |
2.66 |
0.04 |
0.29 |
8.93 |