Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1ZE2
BPC Identified: 17
Ambiguities: 0
| tRNA |
1ZE2 |
1!C:1!D |
G:G |
rH_1 [tWH][VII] |
11.5 |
24.66; 20.39 |
4.26 |
153.16 |
0.21 |
21.71 |
| tRNA |
1ZE2 |
2!C:22!C |
G:C |
WC [cWW][XIX] |
10.72 |
50.14; 53.97 |
3.83 |
-15.44 |
0.02 |
16.33 |
| tRNA |
1ZE2 |
3!C:21!C |
C:G |
WC [cWW][XIX] |
10.79 |
52.57; 52.08 |
0.49 |
-8.96 |
0.02 |
12.87 |
| tRNA |
1ZE2 |
4!C:20!C |
C:G |
WC [cWW][XIX] |
10.92 |
50.24; 51.92 |
1.68 |
-2.3 |
0.14 |
7.25 |
| tRNA |
1ZE2 |
5!C:19!C |
A:U |
WC [cWW][XX] |
10.7 |
52.48; 54.62 |
2.14 |
-3.27 |
0.11 |
13.25 |
| tRNA |
1ZE2 |
6!C:18!C |
C:G |
WC [cWW][XIX] |
10.69 |
54.54; 54.89 |
0.35 |
-14.91 |
0.28 |
14.16 |
| tRNA |
1ZE2 |
7!C:17!C |
G:C |
WC [cWW][XIX] |
10.64 |
49.6; 52.32 |
2.72 |
-12.81 |
0.02 |
11.1 |
| tRNA |
1ZE2 |
8!C:16!C |
G:C |
WC [cWW][XIX] |
10.47 |
52.81; 55.65 |
2.83 |
-4.8 |
0.02 |
8.89 |
| tRNA |
1ZE2 |
9!C:13!C |
U:A |
rH_1 [tWH][XXIV] |
9.68 |
36.84; 20.46 |
16.37 |
-129.94 |
0.0 |
21.98 |
| tRNA |
1ZE2 |
2!D:22!D |
G:C |
WC [cWW][XIX] |
10.83 |
50.61; 52.0 |
1.39 |
-20.73 |
0.29 |
26.43 |
| tRNA |
1ZE2 |
3!D:21!D |
C:G |
WC [cWW][XIX] |
10.89 |
52.5; 49.86 |
2.64 |
-14.59 |
0.03 |
16.53 |
| tRNA |
1ZE2 |
4!D:20!D |
C:G |
WC [cWW][XIX] |
10.72 |
56.68; 54.53 |
2.15 |
-6.41 |
0.35 |
16.16 |
| tRNA |
1ZE2 |
5!D:19!D |
A:U |
WC [cWW][XX] |
10.79 |
52.74; 52.46 |
0.28 |
-7.06 |
0.01 |
12.68 |
| tRNA |
1ZE2 |
6!D:18!D |
C:G |
WC [cWW][XIX] |
10.45 |
58.18; 53.87 |
4.31 |
-15.74 |
0.22 |
16.56 |
| tRNA |
1ZE2 |
7!D:17!D |
G:C |
WC [cWW][XIX] |
10.77 |
52.47; 52.35 |
0.12 |
-13.77 |
0.5 |
20.49 |
| tRNA |
1ZE2 |
8!D:16!D |
G:C |
WC [cWW][XIX] |
10.95 |
50.73; 49.37 |
1.36 |
-11.23 |
0.12 |
8.89 |
| tRNA |
1ZE2 |
9!D:13!D |
U:A |
rH_1 [tWH][XXIV] |
10.14 |
32.81; 19.07 |
13.74 |
-132.82 |
0.07 |
19.2 |