Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1ZEV
BPC Identified: 17
Ambiguities: 0
| mRNA |
1ZEV |
1!A:18!B |
C:G |
WC [cWW][XIX] |
10.56 |
53.18; 57.63 |
4.45 |
-7.23 |
0.31 |
12.89 |
| mRNA |
1ZEV |
2!A:17!B |
U:U |
Wb [cWW][XVI] |
9.15 |
40.02; 70.78 |
30.76 |
-10.91 |
0.24 |
17.89 |
| mRNA |
1ZEV |
3!A:16!B |
G:C |
WC [cWW][XIX] |
10.67 |
51.5; 55.98 |
4.47 |
-5.03 |
0.26 |
9.99 |
| mRNA |
1ZEV |
4!A:15!B |
C:G |
WC [cWW][XIX] |
10.62 |
55.53; 54.49 |
1.04 |
-2.99 |
0.13 |
0.62 |
| mRNA |
1ZEV |
6!A:13!B |
G:C |
WC [cWW][XIX] |
10.48 |
52.39; 60.17 |
7.78 |
-8.39 |
0.01 |
12.38 |
| mRNA |
1ZEV |
7!A:12!B |
C:G |
WC [cWW][XIX] |
10.59 |
57.03; 51.54 |
5.49 |
-9.73 |
0.5 |
22.13 |
| mRNA |
1ZEV |
8!A:11!B |
U:U |
WC_mo [---][-] |
10.02 |
47.78; 50.5 |
2.72 |
-8.27 |
0.11 |
23.21 |
| mRNA |
1ZEV |
9!A:10!B |
G:C |
WC [cWW][XIX] |
10.0 |
53.29; 65.72 |
12.43 |
-12.54 |
0.05 |
16.73 |
| mRNA |
1ZEV |
10!A:9!B |
C:G |
WC [cWW][XIX] |
10.67 |
54.17; 55.81 |
1.63 |
-7.13 |
0.05 |
14.35 |
| mRNA |
1ZEV |
11!A:8!B |
U:U |
WC [---][-] |
9.14 |
47.35; 57.56 |
10.21 |
-7.43 |
0.13 |
15.6 |
| mRNA |
1ZEV |
12!A:7!B |
G:C |
WC [cWW][XIX] |
10.56 |
47.95; 57.24 |
9.28 |
-3.27 |
0.19 |
8.39 |
| mRNA |
1ZEV |
13!A:6!B |
C:G |
WC [cWW][XIX] |
10.53 |
54.82; 55.43 |
0.61 |
-7.31 |
0.41 |
15.99 |
| mRNA |
1ZEV |
14!A:5!B |
U:U |
WC [---][-] |
10.46 |
51.48; 53.46 |
1.97 |
-10.54 |
0.06 |
17.37 |
| mRNA |
1ZEV |
15!A:4!B |
G:C |
WC [cWW][XIX] |
10.6 |
53.76; 55.64 |
1.88 |
-6.49 |
0.06 |
9.33 |
| mRNA |
1ZEV |
16!A:3!B |
C:G |
WC [cWW][XIX] |
10.45 |
54.59; 55.94 |
1.35 |
-14.56 |
0.02 |
19.6 |
| mRNA |
1ZEV |
17!A:2!B |
U:U |
WC_mo [---][-] |
10.46 |
39.13; 51.54 |
12.41 |
-7.92 |
0.04 |
15.0 |
| mRNA |
1ZEV |
18!A:1!B |
G:C |
WC [cWW][XIX] |
10.54 |
51.82; 59.15 |
7.33 |
-5.3 |
0.06 |
5.39 |