Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1ZFV BPC Identified: 30 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
HP_ribozyme 1ZFV 2!A:13!B C:G WC [cWW][XIX] 10.71 55.23; 53.3 1.93 -5.06 0.11 13.56
HP_ribozyme 1ZFV 3!A:12!B C:G WC [cWW][XIX] 10.44 55.73; 56.73 1.0 -4.1 0.07 6.08
HP_ribozyme 1ZFV 4!A:11!B C:G WC [cWW][XIX] 10.65 57.85; 55.94 1.91 -1.64 0.15 3.78
HP_ribozyme 1ZFV 5!A:9!B A:A S [tSH][-] 9.95 81.29; 2.29 79.0 -26.59 0.01 13.3
HP_ribozyme 1ZFV 6!A:25!C G:C WC [cWW][XIX] 10.54 54.89; 54.94 0.05 -15.43 0.37 17.26
HP_ribozyme 1ZFV 8!A:7!B C:A Wb* [cWW][-] 11.51 41.1; 71.86 30.76 -0.53 0.37 26.74
HP_ribozyme 1ZFV 9!A:6!B C:G WC [cWW][XIX] 10.68 55.18; 59.36 4.18 -6.73 0.3 12.78
HP_ribozyme 1ZFV 10!A:5!B A:U WC [cWW][XX] 10.36 57.55; 60.23 2.68 -7.2 0.02 11.43
HP_ribozyme 1ZFV 11!A:4!B C:G WC [cWW][XIX] 10.36 58.94; 58.41 0.53 -3.7 0.3 11.42
HP_ribozyme 1ZFV 12!A:3!B C:G WC [cWW][XIX] 10.26 60.5; 58.33 2.18 -11.89 0.06 16.73
HP_ribozyme 1ZFV 13!A:2!B G:C WC [cWW][XIX] 10.32 57.27; 58.86 1.58 -9.08 0.09 11.99
HP_ribozyme 1ZFV 10!B:25!C A:C rpS(sb:O2*-N3) [cSS][-] 5.5 93.75; 149.61 55.85 -75.69 0.33 48.29
HP_ribozyme 1ZFV 11!B:24!C G:A rpS(sb:O2*-N3) [---][-] 5.41 151.95; 95.04 56.91 -76.64 1.17 47.42
HP_ribozyme 1ZFV 15!C:49!D G:C WC [cWW][XIX] 10.7 54.09; 55.64 1.54 -10.93 0.41 10.17
HP_ribozyme 1ZFV 16!C:48!D G:C WC [cWW][XIX] 10.64 51.07; 54.15 3.07 -11.37 0.31 19.53
HP_ribozyme 1ZFV 17!C:47!D C:G WC [cWW][XIX] 10.64 54.27; 55.39 1.12 -8.03 0.33 16.8
HP_ribozyme 1ZFV 18!C:46!D A:U WC [cWW][XX] 10.24 59.58; 59.49 0.09 -2.54 0.01 5.44
HP_ribozyme 1ZFV 19!C:45!D G:C WC [cWW][XIX] 10.28 56.22; 60.0 3.79 0.28 0.07 12.71
HP_ribozyme 1ZFV 20!C:44!D A:C Wb* [cWW][-] 10.43 74.88; 49.66 25.22 -1.87 0.03 15.21
HP_ribozyme 1ZFV 21!C:43!D G:A S [tSH][XI] 9.4 95.69; 3.45 92.24 37.64 0.01 5.23
HP_ribozyme 1ZFV 22!C:41!D A:U rH_1 [tWH][XXIV] 9.82 16.53; 33.23 16.7 -159.44 0.32 11.79
HP_ribozyme 1ZFV 23!C:40!D A:A rH [tWH][V] 12.55 13.17; 28.3 15.13 174.44 0.62 22.98
HP_ribozyme 1ZFV 24!C:38!D A:A rpS* [---][-] 11.72 6.57; 50.26 43.7 166.68 0.44 12.78
HP_ribozyme 1ZFV 26!C:36!D A:G WC [cWW][VIII] 12.63 46.41; 48.2 1.79 -13.2 0.01 19.15
HP_ribozyme 1ZFV 27!C:36!D C:G WC_Mo [cWW][XIX] 10.04 75.84; 62.27 13.57 -21.13 2.43 12.58
HP_ribozyme 1ZFV 27!C:35!D C:G WC [cWW][XIX] 10.6 54.02; 53.2 0.81 -20.57 0.27 22.4
HP_ribozyme 1ZFV 28!C:34!D A:U WC [cWW][XX] 10.45 54.96; 55.65 0.69 -18.09 0.01 20.95
HP_ribozyme 1ZFV 29!C:33!D C:G WC [cWW][XIX] 10.58 56.0; 54.21 1.79 -10.73 0.52 17.59
HP_ribozyme 1ZFV 30!C:32!D G:C WC [cWW][XIX] 10.82 53.78; 52.79 0.99 -13.85 0.31 13.86
HP_ribozyme 1ZFV 31!C:31!D A:U WC [cWW][XX] 10.64 59.86; 50.64 9.22 -5.09 0.02 11.34