Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1ZFX BPC Identified: 30 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
HP_ribozyme 1ZFX 2!A:13!B C:G WC [cWW][XIX] 10.54 58.09; 56.1 1.99 -7.85 0.0 14.58
HP_ribozyme 1ZFX 3!A:12!B C:G WC [cWW][XIX] 10.61 54.62; 55.55 0.93 -5.8 0.07 6.97
HP_ribozyme 1ZFX 4!A:11!B C:G WC [cWW][XIX] 10.53 57.74; 55.84 1.9 -1.44 0.2 2.53
HP_ribozyme 1ZFX 5!A:9!B A:A S [tSH][-] 10.12 82.84; 2.07 80.77 -76.52 0.11 15.07
HP_ribozyme 1ZFX 6!A:25!C G:C WC [cWW][XIX] 10.51 55.05; 55.77 0.72 -11.84 0.41 16.07
HP_ribozyme 1ZFX 7!A:8!B U:U Wb_mo [cWW][XVI] 10.86 18.17; 61.65 43.49 4.06 0.32 25.03
HP_ribozyme 1ZFX 8!A:7!B C:A Wb* [cWW][-] 11.59 40.24; 69.14 28.9 -1.84 0.26 22.9
HP_ribozyme 1ZFX 9!A:6!B C:G WC [cWW][XIX] 10.59 56.56; 57.31 0.75 -8.85 0.47 16.33
HP_ribozyme 1ZFX 10!A:5!B A:U WC [cWW][XX] 10.14 55.58; 66.68 11.1 -8.64 0.04 15.02
HP_ribozyme 1ZFX 11!A:4!B C:G WC [cWW][XIX] 10.24 60.42; 60.59 0.17 -4.23 0.41 13.74
HP_ribozyme 1ZFX 12!A:3!B C:G WC [cWW][XIX] 10.29 59.95; 59.86 0.09 -6.96 0.16 12.72
HP_ribozyme 1ZFX 13!A:2!B G:C WC [cWW][XIX] 10.64 58.05; 51.47 6.58 -7.21 0.05 9.29
HP_ribozyme 1ZFX 10!B:25!C A:C rpS(sb:O2*-N3) [cSS][-] 5.38 94.31; 149.37 55.06 -74.93 0.83 48.35
HP_ribozyme 1ZFX 11!B:24!C G:A rpS(sb:O2*-N3) [---][-] 5.33 151.39; 94.61 56.78 -82.38 1.11 45.97
HP_ribozyme 1ZFX 15!C:49!D G:C WC [cWW][XIX] 10.63 53.34; 56.05 2.71 -7.97 0.36 6.96
HP_ribozyme 1ZFX 16!C:48!D G:C WC [cWW][XIX] 10.6 51.3; 54.27 2.97 -11.44 0.13 15.88
HP_ribozyme 1ZFX 17!C:47!D C:G WC [cWW][XIX] 10.58 55.1; 54.24 0.86 -10.93 0.35 17.9
HP_ribozyme 1ZFX 18!C:46!D A:U WC [cWW][XX] 10.3 59.02; 57.75 1.28 -2.92 0.0 9.79
HP_ribozyme 1ZFX 19!C:45!D G:C WC [cWW][XIX] 10.6 56.18; 56.32 0.14 1.43 0.04 9.27
HP_ribozyme 1ZFX 20!C:44!D A:C Wb* [cWW][-] 10.38 75.78; 51.42 24.36 0.3 0.03 16.07
HP_ribozyme 1ZFX 21!C:43!D G:A S [tSH][XI] 9.36 99.09; 3.96 95.12 40.81 0.36 5.6
HP_ribozyme 1ZFX 22!C:41!D A:U rH_1 [tWH][XXIV] 9.66 20.7; 31.52 10.82 -159.55 0.21 12.11
HP_ribozyme 1ZFX 23!C:40!D A:A rH [tWH][V] 12.45 13.44; 29.29 15.85 -178.65 0.59 20.05
HP_ribozyme 1ZFX 24!C:38!D A:A rpS* [---][-] 12.01 8.24; 47.93 39.7 163.1 0.3 13.0
HP_ribozyme 1ZFX 26!C:36!D A:G WC [cWW][VIII] 12.63 47.03; 46.05 0.97 -12.1 0.01 19.12
HP_ribozyme 1ZFX 27!C:35!D C:G WC [cWW][XIX] 10.45 54.72; 53.63 1.09 -20.26 0.39 23.95
HP_ribozyme 1ZFX 28!C:34!D A:U WC [cWW][XX] 10.42 55.06; 55.87 0.8 -17.51 0.01 19.45
HP_ribozyme 1ZFX 29!C:33!D C:G WC [cWW][XIX] 10.56 55.15; 54.4 0.75 -12.93 0.2 17.1
HP_ribozyme 1ZFX 30!C:32!D G:C WC [cWW][XIX] 10.78 52.72; 54.63 1.92 -14.24 0.28 14.07
HP_ribozyme 1ZFX 31!C:31!D A:U WC [cWW][XX] 10.56 60.51; 50.63 9.88 -4.02 0.06 8.53