Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1ZO1
BPC Identified: 30
Ambiguities: 0
| tRNA |
1ZO1 |
1!F:72!F |
G:C |
WC [cWW][XIX] |
10.15 |
49.68; 59.09 |
9.41 |
4.75 |
0.94 |
4.77 |
| tRNA |
1ZO1 |
2!F:71!F |
C:G |
WC [cWW][XIX] |
10.1 |
56.49; 53.87 |
2.62 |
1.13 |
0.43 |
26.24 |
| tRNA |
1ZO1 |
3!F:70!F |
G:C |
WC [cWW][XIX] |
10.16 |
57.51; 55.78 |
1.73 |
6.03 |
0.97 |
14.15 |
| tRNA |
1ZO1 |
4!F:69!F |
G:U |
Wb [cWW][XXVIII] |
10.18 |
48.79; 60.4 |
11.6 |
9.74 |
0.12 |
19.59 |
| tRNA |
1ZO1 |
5!F:68!F |
A:U |
WC [cWW][XX] |
9.91 |
52.07; 60.27 |
8.21 |
2.87 |
1.05 |
4.82 |
| tRNA |
1ZO1 |
6!F:67!F |
U:A |
WC [cWW][XX] |
10.1 |
58.29; 54.47 |
3.81 |
9.89 |
0.51 |
13.29 |
| tRNA |
1ZO1 |
7!F:66!F |
U:A |
WC [cWW][XX] |
10.32 |
55.38; 49.84 |
5.54 |
16.39 |
0.25 |
17.76 |
| tRNA |
1ZO1 |
8!F:14!F |
U:A |
rH_1 [tWH][XXIV] |
9.37 |
26.93; 23.26 |
3.67 |
147.41 |
1.04 |
30.77 |
| tRNA |
1ZO1 |
9!F:23!F |
A:A |
rS* [tHH][-] |
10.64 |
19.72; 14.45 |
5.27 |
117.72 |
1.02 |
30.5 |
| tRNA |
1ZO1 |
10!F:45!F |
G:G |
pS_1 [cSH][-] |
8.98 |
36.68; 122.95 |
86.27 |
-2.09 |
0.4 |
33.69 |
| tRNA |
1ZO1 |
10!F:25!F |
G:C |
WC [cWW][XIX] |
10.47 |
53.91; 55.01 |
1.1 |
-0.18 |
0.38 |
17.3 |
| tRNA |
1ZO1 |
11!F:24!F |
C:G |
WC [cWW][XIX] |
10.32 |
58.04; 50.35 |
7.69 |
-7.71 |
0.25 |
11.09 |
| tRNA |
1ZO1 |
12!F:23!F |
U:A |
WC [cWW][XX] |
10.57 |
51.37; 51.52 |
0.15 |
-0.38 |
0.21 |
2.71 |
| tRNA |
1ZO1 |
13!F:22!F |
C:G |
WC [cWW][XIX] |
10.6 |
50.8; 55.61 |
4.81 |
9.04 |
0.06 |
17.3 |
| tRNA |
1ZO1 |
15!F:48!F |
G:C |
rWb [tWW][XXII] |
10.29 |
39.69; 60.84 |
21.14 |
-171.59 |
0.48 |
6.43 |
| tRNA |
1ZO1 |
16!F:60!F |
U:C |
pfS*_1 [cWS][-] |
6.35 |
32.77; 102.26 |
69.5 |
-141.0 |
0.7 |
56.82 |
| tRNA |
1ZO1 |
19!F:56!F |
G:C |
WC [cWW][XIX] |
10.2 |
56.95; 52.12 |
4.83 |
-15.67 |
1.27 |
43.61 |
| tRNA |
1ZO1 |
22!F:46!F |
G:G |
rH_1 [tWH][VII] |
10.84 |
32.09; 23.8 |
8.29 |
-168.98 |
0.44 |
8.45 |
| tRNA |
1ZO1 |
27!F:43!F |
C:G |
WC [cWW][XIX] |
10.65 |
51.61; 50.87 |
0.74 |
-3.3 |
0.53 |
23.69 |
| tRNA |
1ZO1 |
28!F:42!F |
C:G |
WC [cWW][XIX] |
10.51 |
51.32; 56.66 |
5.33 |
6.14 |
0.2 |
17.98 |
| tRNA |
1ZO1 |
29!F:41!F |
A:U |
WC [cWW][XX] |
10.75 |
49.81; 48.39 |
1.41 |
17.17 |
0.37 |
13.95 |
| tRNA |
1ZO1 |
30!F:40!F |
G:C |
WC [cWW][XIX] |
10.91 |
50.01; 49.47 |
0.54 |
0.92 |
0.55 |
18.83 |
| tRNA |
1ZO1 |
31!F:39!F |
A:U |
Wb*_PSU [---][-] |
11.05 |
55.06; 59.62 |
4.56 |
-2.58 |
0.26 |
11.92 |
| tRNA |
1ZO1 |
33!F:35!F |
U:A |
S(sb:O2*-N7) [---][-] |
6.14 |
70.08; 47.09 |
22.98 |
-164.84 |
1.15 |
25.86 |
| tRNA |
1ZO1 |
49!F:65!F |
C:G |
WC [cWW][XIX] |
10.57 |
50.29; 55.96 |
5.67 |
7.45 |
0.34 |
20.71 |
| tRNA |
1ZO1 |
50!F:64!F |
U:A |
WC [cWW][XX] |
10.6 |
48.63; 53.64 |
5.01 |
17.23 |
0.58 |
11.25 |
| tRNA |
1ZO1 |
51!F:63!F |
G:C |
WC [cWW][XIX] |
10.28 |
50.66; 57.03 |
6.38 |
-0.77 |
0.44 |
13.0 |
| tRNA |
1ZO1 |
52!F:62!F |
U:A |
WC [cWW][XX] |
10.33 |
56.18; 48.78 |
7.4 |
1.92 |
0.42 |
12.68 |
| tRNA |
1ZO1 |
53!F:61!F |
G:C |
WC [cWW][XIX] |
10.53 |
50.44; 53.44 |
3.0 |
12.13 |
0.15 |
22.02 |
| tRNA |
1ZO1 |
54!F:58!F |
U:A |
rH_1 [tWH][XXIV] |
9.27 |
25.57; 26.93 |
1.36 |
-173.26 |
0.82 |
5.12 |