Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1ZX7
BPC Identified: 50
Ambiguities: 0
| rRNA |
1ZX7 |
2!A:33!B |
G:C |
WC [cWW][XIX] |
10.49 |
55.49; 52.0 |
3.48 |
-15.21 |
0.14 |
21.57 |
| rRNA |
1ZX7 |
3!A:32!B |
U:A |
WC [cWW][XX] |
10.81 |
48.5; 57.6 |
9.1 |
-11.26 |
0.1 |
23.77 |
| rRNA |
1ZX7 |
4!A:31!B |
G:C |
WC [cWW][XIX] |
10.47 |
54.66; 55.78 |
1.12 |
-5.27 |
0.12 |
19.0 |
| rRNA |
1ZX7 |
5!A:30!B |
G:C |
WC [cWW][XIX] |
10.53 |
54.21; 54.37 |
0.16 |
-9.64 |
0.5 |
6.79 |
| rRNA |
1ZX7 |
6!A:29!B |
U:A |
WC [cWW][XX] |
10.06 |
59.3; 56.24 |
3.06 |
-17.75 |
0.15 |
17.41 |
| rRNA |
1ZX7 |
7!A:28!B |
G:C |
WC [cWW][XIX] |
10.66 |
52.52; 55.75 |
3.23 |
-7.53 |
0.17 |
8.26 |
| rRNA |
1ZX7 |
10!A:26!B |
G:C |
WC [cWW][XIX] |
10.53 |
55.3; 52.32 |
2.99 |
-17.65 |
0.92 |
13.82 |
| rRNA |
1ZX7 |
11!A:25!B |
U:U |
Wb [cWW][XVI] |
8.55 |
71.94; 47.02 |
24.92 |
-18.44 |
0.62 |
14.62 |
| rRNA |
1ZX7 |
12!A:24!B |
C:G |
WC [cWW][XIX] |
10.36 |
59.36; 61.14 |
1.78 |
-5.23 |
0.45 |
27.47 |
| rRNA |
1ZX7 |
13!A:23!B |
G:C |
WC [cWW][XIX] |
10.88 |
53.5; 52.06 |
1.44 |
-4.54 |
0.12 |
6.18 |
| rRNA |
1ZX7 |
14!A:22!B |
C:G |
WC [cWW][XIX] |
10.43 |
50.73; 59.33 |
8.6 |
-10.62 |
0.31 |
22.68 |
| rRNA |
1ZX7 |
15!A:21!B |
G:C |
WC [cWW][XIX] |
10.78 |
51.36; 51.46 |
0.1 |
-7.4 |
0.5 |
20.1 |
| rRNA |
1ZX7 |
34!B:16!G |
C:G |
WC [cWW][XIX] |
10.64 |
58.75; 57.29 |
1.46 |
-9.06 |
0.14 |
11.01 |
| rRNA |
1ZX7 |
2!C:33!D |
G:C |
WC [cWW][XIX] |
10.51 |
53.33; 64.21 |
10.87 |
-7.99 |
0.16 |
11.4 |
| rRNA |
1ZX7 |
3!C:32!D |
U:A |
WC [cWW][XX] |
10.26 |
60.69; 55.53 |
5.16 |
-10.06 |
0.26 |
14.8 |
| rRNA |
1ZX7 |
4!C:31!D |
G:C |
WC [cWW][XIX] |
10.64 |
55.3; 58.08 |
2.78 |
-13.12 |
0.49 |
19.4 |
| rRNA |
1ZX7 |
5!C:30!D |
G:C |
WC [cWW][XIX] |
10.54 |
55.91; 56.45 |
0.55 |
-6.11 |
0.21 |
21.5 |
| rRNA |
1ZX7 |
6!C:29!D |
U:A |
WC [cWW][XX] |
10.4 |
57.09; 58.35 |
1.26 |
-15.08 |
0.09 |
25.15 |
| rRNA |
1ZX7 |
7!C:28!D |
G:C |
WC [cWW][XIX] |
10.26 |
58.71; 61.56 |
2.85 |
-18.92 |
0.32 |
17.29 |
| rRNA |
1ZX7 |
10!C:26!D |
G:C |
WC [cWW][XIX] |
10.46 |
55.76; 63.42 |
7.66 |
-1.77 |
0.07 |
16.82 |
| rRNA |
1ZX7 |
11!C:25!D |
U:U |
Wb [cWW][XVI] |
9.1 |
78.24; 39.99 |
38.25 |
-11.01 |
0.33 |
15.34 |
| rRNA |
1ZX7 |
12!C:24!D |
C:G |
WC [cWW][XIX] |
10.02 |
66.76; 53.27 |
13.49 |
0.63 |
0.29 |
15.72 |
| rRNA |
1ZX7 |
13!C:23!D |
G:C |
WC [cWW][XIX] |
10.69 |
53.61; 60.58 |
6.98 |
0.25 |
0.16 |
7.49 |
| rRNA |
1ZX7 |
14!C:22!D |
C:G |
WC_Mo [cWW][XIX] |
10.71 |
71.96; 55.63 |
16.33 |
-7.29 |
0.35 |
11.89 |
| rRNA |
1ZX7 |
15!C:21!D |
G:C |
WC [cWW][XIX] |
10.97 |
48.93; 52.15 |
3.22 |
3.92 |
0.08 |
12.71 |
| rRNA |
1ZX7 |
16!C:34!F |
G:C |
WC [cWW][XIX] |
11.08 |
51.6; 51.68 |
0.07 |
-4.5 |
0.05 |
11.12 |
| rRNA |
1ZX7 |
23!D:16!G |
C:G |
rS(sp:O2*-O1P) [---][-] |
7.4 |
135.15; 118.93 |
16.22 |
141.51 |
2.43 |
16.72 |
| rRNA |
1ZX7 |
2!E:33!F |
G:C |
WC [cWW][XIX] |
10.48 |
52.92; 62.82 |
9.9 |
-15.31 |
0.28 |
21.46 |
| rRNA |
1ZX7 |
3!E:32!F |
U:A |
WC [cWW][XX] |
10.29 |
57.09; 56.2 |
0.89 |
-17.44 |
0.2 |
23.13 |
| rRNA |
1ZX7 |
4!E:31!F |
G:C |
WC [cWW][XIX] |
10.53 |
48.73; 58.34 |
9.61 |
-13.6 |
0.7 |
25.23 |
| rRNA |
1ZX7 |
5!E:30!F |
G:C |
WC [cWW][XIX] |
10.58 |
56.64; 54.1 |
2.54 |
-12.63 |
0.12 |
18.63 |
| rRNA |
1ZX7 |
6!E:29!F |
U:A |
WC [cWW][XX] |
10.56 |
52.48; 59.41 |
6.93 |
-21.88 |
0.18 |
25.94 |
| rRNA |
1ZX7 |
7!E:28!F |
G:C |
WC [cWW][XIX] |
10.51 |
54.76; 61.86 |
7.1 |
-13.34 |
0.1 |
14.48 |
| rRNA |
1ZX7 |
10!E:26!F |
G:C |
WC [cWW][XIX] |
10.74 |
56.79; 52.17 |
4.62 |
-1.28 |
0.46 |
3.08 |
| rRNA |
1ZX7 |
11!E:25!F |
U:U |
Wb [cWW][XVI] |
8.87 |
73.64; 40.46 |
33.18 |
-15.9 |
0.02 |
17.56 |
| rRNA |
1ZX7 |
12!E:24!F |
C:G |
WC [cWW][XIX] |
10.0 |
62.56; 53.42 |
9.14 |
-11.53 |
0.25 |
27.68 |
| rRNA |
1ZX7 |
13!E:23!F |
G:C |
WC [cWW][XIX] |
10.7 |
53.04; 54.46 |
1.43 |
-10.76 |
0.34 |
10.42 |
| rRNA |
1ZX7 |
14!E:22!F |
C:G |
WC [cWW][XIX] |
10.19 |
64.04; 53.41 |
10.63 |
-17.46 |
0.02 |
21.27 |
| rRNA |
1ZX7 |
2!G:33!H |
G:C |
WC [cWW][XIX] |
10.54 |
55.08; 53.52 |
1.56 |
-13.53 |
0.29 |
20.57 |
| rRNA |
1ZX7 |
3!G:32!H |
U:A |
WC [cWW][XX] |
10.85 |
50.8; 54.56 |
3.76 |
-2.98 |
0.04 |
24.53 |
| rRNA |
1ZX7 |
4!G:31!H |
G:C |
WC [cWW][XIX] |
10.53 |
59.67; 53.12 |
6.55 |
-0.91 |
0.23 |
10.13 |
| rRNA |
1ZX7 |
5!G:30!H |
G:C |
WC [cWW][XIX] |
10.56 |
52.56; 55.45 |
2.89 |
-3.66 |
0.46 |
12.63 |
| rRNA |
1ZX7 |
6!G:29!H |
U:A |
WC [cWW][XX] |
10.25 |
61.45; 55.25 |
6.2 |
-7.07 |
0.08 |
10.74 |
| rRNA |
1ZX7 |
7!G:28!H |
G:C |
WC [cWW][XIX] |
10.62 |
55.19; 54.84 |
0.34 |
-0.57 |
0.12 |
6.76 |
| rRNA |
1ZX7 |
10!G:26!H |
G:C |
WC [cWW][XIX] |
10.43 |
53.38; 59.0 |
5.62 |
-12.99 |
0.54 |
26.24 |
| rRNA |
1ZX7 |
11!G:25!H |
U:U |
Wb [cWW][XVI] |
8.77 |
73.15; 49.77 |
23.38 |
-15.17 |
0.02 |
18.53 |
| rRNA |
1ZX7 |
12!G:24!H |
C:G |
WC [cWW][XIX] |
10.29 |
62.93; 58.84 |
4.09 |
0.45 |
0.64 |
25.38 |
| rRNA |
1ZX7 |
13!G:23!H |
G:C |
WC [cWW][XIX] |
10.91 |
53.67; 57.36 |
3.68 |
4.56 |
0.13 |
7.37 |
| rRNA |
1ZX7 |
14!G:22!H |
C:G |
WC [cWW][XIX] |
10.56 |
54.74; 59.0 |
4.26 |
0.35 |
0.34 |
14.91 |
| rRNA |
1ZX7 |
15!G:21!H |
G:C |
Wb* [---][-] |
10.71 |
68.02; 49.93 |
18.09 |
-1.66 |
0.23 |
15.74 |