Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 205D
BPC Identified: 12
Ambiguities: 0
| dsRNA |
205D |
1!A:24!B |
G:C |
WC [cWW][XIX] |
10.68 |
49.09; 57.62 |
8.53 |
-10.5 |
0.53 |
26.63 |
| dsRNA |
205D |
2!A:23!B |
G:C |
WC [cWW][XIX] |
10.55 |
52.51; 55.12 |
2.61 |
-0.45 |
0.12 |
14.39 |
| dsRNA |
205D |
3!A:22!B |
A:U |
WC [cWW][XX] |
10.62 |
53.03; 54.53 |
1.5 |
8.33 |
0.22 |
17.31 |
| dsRNA |
205D |
4!A:21!B |
C:G |
WC [cWW][XIX] |
10.72 |
53.77; 55.87 |
2.1 |
0.79 |
0.21 |
10.11 |
| dsRNA |
205D |
5!A:20!B |
U:G |
Wb [cWW][XXVIII] |
10.55 |
67.18; 41.97 |
25.21 |
6.14 |
0.08 |
13.81 |
| dsRNA |
205D |
6!A:19!B |
U:U |
Wb [cWW][XVI] |
9.13 |
62.26; 41.48 |
20.79 |
-9.82 |
0.04 |
35.13 |
| dsRNA |
205D |
7!A:18!B |
U:U |
WC [---][-] |
9.02 |
48.34; 64.21 |
15.87 |
-9.09 |
0.33 |
8.98 |
| dsRNA |
205D |
8!A:17!B |
G:U |
Wb [cWW][XXVIII] |
10.58 |
38.8; 68.76 |
29.97 |
-5.16 |
0.36 |
19.08 |
| dsRNA |
205D |
9!A:16!B |
G:C |
WC [cWW][XIX] |
10.72 |
44.55; 56.07 |
11.53 |
15.22 |
0.42 |
30.32 |
| dsRNA |
205D |
10!A:15!B |
U:A |
WC [cWW][XX] |
10.64 |
53.25; 59.97 |
6.72 |
9.81 |
0.38 |
19.23 |
| dsRNA |
205D |
11!A:14!B |
C:G |
WC [cWW][XIX] |
10.9 |
52.53; 49.4 |
3.14 |
1.9 |
0.17 |
17.01 |
| dsRNA |
205D |
12!A:13!B |
C:G |
WC [cWW][XIX] |
11.38 |
51.48; 47.7 |
3.79 |
-1.49 |
0.12 |
14.04 |