Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 255D
BPC Identified: 12
Ambiguities: 0
| dsRNA |
255D |
1!A:12!B |
G:C |
WC [cWW][XIX] |
10.52 |
55.75; 58.53 |
2.78 |
-2.59 |
0.1 |
1.08 |
| dsRNA |
255D |
2!A:11!B |
G:C |
WC [cWW][XIX] |
10.38 |
58.17; 57.37 |
0.8 |
-11.24 |
0.03 |
14.31 |
| dsRNA |
255D |
3!A:10!B |
A:U |
WC [cWW][XX] |
10.43 |
53.25; 60.15 |
6.9 |
0.2 |
0.03 |
9.72 |
| dsRNA |
255D |
4!A:9!B |
C:G |
WC [cWW][XIX] |
10.63 |
57.76; 55.18 |
2.58 |
-7.01 |
0.18 |
10.17 |
| dsRNA |
255D |
5!A:8!B |
U:G |
Wb [cWW][XXVIII] |
10.31 |
70.67; 42.63 |
28.04 |
-0.37 |
0.17 |
18.01 |
| dsRNA |
255D |
6!A:7!B |
U:C |
WC_mo [cWW][XVIII] |
11.69 |
37.01; 41.24 |
4.23 |
2.77 |
0.03 |
12.96 |
| dsRNA |
255D |
7!A:6!B |
C:U |
WC_mo [cWW][XVIII] |
11.69 |
41.24; 37.01 |
4.23 |
2.77 |
0.03 |
12.96 |
| dsRNA |
255D |
8!A:5!B |
G:U |
Wb [cWW][XXVIII] |
10.31 |
42.63; 70.67 |
28.04 |
-0.37 |
0.17 |
18.01 |
| dsRNA |
255D |
9!A:4!B |
G:C |
WC [cWW][XIX] |
10.63 |
55.18; 57.76 |
2.58 |
-7.01 |
0.18 |
10.17 |
| dsRNA |
255D |
10!A:3!B |
U:A |
WC [cWW][XX] |
10.43 |
60.15; 53.25 |
6.9 |
0.2 |
0.03 |
9.72 |
| dsRNA |
255D |
11!A:2!B |
C:G |
WC [cWW][XIX] |
10.38 |
57.37; 58.17 |
0.8 |
-11.24 |
0.03 |
14.31 |
| dsRNA |
255D |
12!A:1!B |
C:G |
WC [cWW][XIX] |
10.52 |
58.53; 55.75 |
2.78 |
-2.59 |
0.1 |
1.08 |