Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 283D
BPC Identified: 14
Ambiguities: 0
dsRNA |
283D |
1!A:12!B |
G:C |
WC [cWW][XIX] |
10.72 |
50.18; 57.19 |
7.01 |
-14.11 |
0.07 |
13.91 |
dsRNA |
283D |
2!A:11!B |
G:C |
WC [cWW][XIX] |
10.66 |
49.86; 57.52 |
7.66 |
-10.59 |
0.31 |
14.88 |
dsRNA |
283D |
3!A:10!B |
C:G |
WC [cWW][XIX] |
10.59 |
57.42; 51.77 |
5.65 |
-8.41 |
0.33 |
16.68 |
dsRNA |
283D |
4!A:9!B |
C:G |
WC [cWW][XIX] |
10.48 |
55.9; 56.45 |
0.55 |
-8.67 |
0.11 |
13.42 |
dsRNA |
283D |
5!A:8!B |
G:A |
S [tSH][XI] |
9.51 |
97.31; 9.73 |
87.57 |
-42.01 |
0.84 |
18.7 |
dsRNA |
283D |
5!A:7!B |
G:A |
S(bp:N1-O2P)_1 [---][-] |
10.08 |
67.1; 17.09 |
50.01 |
111.27 |
1.59 |
29.17 |
dsRNA |
283D |
6!A:7!B |
A:A |
rH [tWH][V] |
12.48 |
16.84; 22.94 |
6.1 |
141.04 |
0.4 |
20.24 |
dsRNA |
283D |
7!A:6!B |
A:A |
rH [tWH][V] |
12.48 |
22.95; 16.84 |
6.12 |
141.03 |
0.4 |
20.26 |
dsRNA |
283D |
7!A:5!B |
A:G |
S(bp:N1-O2P)_1 [---][-] |
10.08 |
17.07; 67.09 |
50.01 |
111.27 |
1.59 |
29.19 |
dsRNA |
283D |
8!A:5!B |
A:G |
S [tSH][XI] |
9.51 |
9.72; 97.29 |
87.58 |
-41.94 |
0.84 |
18.7 |
dsRNA |
283D |
9!A:4!B |
G:C |
WC [cWW][XIX] |
10.48 |
56.46; 55.91 |
0.55 |
-8.63 |
0.11 |
13.44 |
dsRNA |
283D |
10!A:3!B |
G:C |
WC [cWW][XIX] |
10.59 |
51.77; 57.42 |
5.65 |
-8.4 |
0.33 |
16.68 |
dsRNA |
283D |
11!A:2!B |
C:G |
WC [cWW][XIX] |
10.66 |
57.52; 49.86 |
7.66 |
-10.62 |
0.31 |
14.86 |
dsRNA |
283D |
12!A:1!B |
C:G |
WC [cWW][XIX] |
10.72 |
57.2; 50.18 |
7.02 |
-14.05 |
0.07 |
13.91 |