Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2A04
BPC Identified: 25
Ambiguities: 0
| rRNA |
2A04 |
2!A:33!B |
G:C |
WC [cWW][XIX] |
10.52 |
47.69; 52.3 |
4.61 |
-13.84 |
0.27 |
14.23 |
| rRNA |
2A04 |
3!A:32!B |
U:A |
WC [cWW][XX] |
10.3 |
52.51; 57.87 |
5.36 |
-8.43 |
0.11 |
14.89 |
| rRNA |
2A04 |
4!A:31!B |
G:C |
WC [cWW][XIX] |
10.7 |
53.51; 54.09 |
0.58 |
-12.4 |
0.49 |
19.08 |
| rRNA |
2A04 |
5!A:30!B |
G:C |
WC [cWW][XIX] |
10.71 |
53.98; 47.96 |
6.02 |
-12.54 |
0.32 |
18.91 |
| rRNA |
2A04 |
6!A:29!B |
U:A |
WC [cWW][XX] |
10.2 |
61.78; 53.64 |
8.15 |
-15.22 |
0.06 |
17.31 |
| rRNA |
2A04 |
7!A:28!B |
G:C |
WC [cWW][XIX] |
10.26 |
54.98; 54.58 |
0.4 |
-7.89 |
0.21 |
16.38 |
| rRNA |
2A04 |
10!A:26!B |
G:C |
WC [cWW][XIX] |
10.66 |
51.36; 54.83 |
3.48 |
5.86 |
0.22 |
7.12 |
| rRNA |
2A04 |
11!A:25!B |
U:U |
Wb_mo [cWW][XVI] |
10.53 |
55.73; 36.03 |
19.7 |
3.44 |
0.56 |
14.85 |
| rRNA |
2A04 |
12!A:24!B |
C:G |
WC [cWW][XIX] |
10.5 |
54.82; 57.37 |
2.55 |
0.0 |
0.13 |
4.36 |
| rRNA |
2A04 |
13!A:23!B |
G:C |
WC [cWW][XIX] |
10.65 |
55.86; 54.21 |
1.65 |
-5.66 |
0.16 |
11.28 |
| rRNA |
2A04 |
14!A:22!B |
C:G |
Wb [---][-] |
10.25 |
70.68; 54.26 |
16.42 |
-8.71 |
0.06 |
12.49 |
| rRNA |
2A04 |
15!A:21!B |
G:C |
WC [cWW][XIX] |
10.45 |
55.6; 55.85 |
0.25 |
-3.25 |
0.05 |
10.45 |
| rRNA |
2A04 |
34!B:16!C |
C:G |
WC [cWW][XIX] |
10.46 |
55.13; 51.42 |
3.71 |
-2.97 |
0.17 |
11.9 |
| rRNA |
2A04 |
2!C:33!D |
G:C |
WC [cWW][XIX] |
10.68 |
51.6; 51.49 |
0.11 |
-12.8 |
0.26 |
14.03 |
| rRNA |
2A04 |
3!C:32!D |
U:A |
WC [cWW][XX] |
10.31 |
52.97; 56.71 |
3.74 |
-8.59 |
0.08 |
15.42 |
| rRNA |
2A04 |
4!C:31!D |
G:C |
WC [cWW][XIX] |
10.93 |
52.76; 51.9 |
0.86 |
-9.25 |
0.22 |
11.98 |
| rRNA |
2A04 |
5!C:30!D |
G:C |
WC [cWW][XIX] |
10.81 |
56.35; 51.45 |
4.9 |
-6.62 |
0.11 |
12.12 |
| rRNA |
2A04 |
6!C:29!D |
U:A |
WC [cWW][XX] |
10.2 |
59.69; 57.45 |
2.25 |
-17.77 |
0.08 |
17.15 |
| rRNA |
2A04 |
7!C:28!D |
G:C |
WC [cWW][XIX] |
10.37 |
54.64; 53.94 |
0.7 |
-8.24 |
0.1 |
14.97 |
| rRNA |
2A04 |
10!C:26!D |
G:C |
WC [cWW][XIX] |
10.63 |
55.27; 51.79 |
3.49 |
9.85 |
0.19 |
7.68 |
| rRNA |
2A04 |
11!C:25!D |
U:U |
WC_mo [---][-] |
10.4 |
55.17; 45.5 |
9.67 |
7.07 |
0.37 |
6.17 |
| rRNA |
2A04 |
12!C:24!D |
C:G |
WC [cWW][XIX] |
10.66 |
51.63; 56.92 |
5.29 |
-1.58 |
0.07 |
6.15 |
| rRNA |
2A04 |
13!C:23!D |
G:C |
WC [cWW][XIX] |
10.65 |
55.02; 57.91 |
2.89 |
-4.2 |
0.11 |
7.18 |
| rRNA |
2A04 |
14!C:22!D |
C:G |
WC [cWW][XIX] |
10.27 |
59.17; 60.92 |
1.74 |
-7.51 |
0.01 |
17.51 |
| rRNA |
2A04 |
15!C:21!D |
G:C |
WC [cWW][XIX] |
10.35 |
53.24; 58.81 |
5.58 |
-3.38 |
0.15 |
16.6 |