Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2A43
BPC Identified: 14
Ambiguities: 0
| vRNA |
2A43 |
3!A:20!A |
G:A |
rS [tSS][-] |
8.12 |
88.08; 58.93 |
29.15 |
151.61 |
1.5 |
44.45 |
| vRNA |
2A43 |
3!A:16!A |
G:C |
WC [cWW][XIX] |
10.5 |
57.19; 57.37 |
0.17 |
-17.13 |
0.04 |
24.26 |
| vRNA |
2A43 |
4!A:15!A |
C:G |
WC [cWW][XIX] |
10.59 |
55.96; 56.88 |
0.92 |
-10.41 |
0.06 |
14.56 |
| vRNA |
2A43 |
5!A:14!A |
G:C |
WC [cWW][XIX] |
10.63 |
54.52; 53.99 |
0.53 |
-10.03 |
0.21 |
15.21 |
| vRNA |
2A43 |
6!A:24!A |
G:A |
fS [tSW][X] |
9.33 |
119.24; 12.0 |
107.24 |
111.35 |
0.28 |
17.72 |
| vRNA |
2A43 |
6!A:13!A |
G:C |
WC [cWW][XIX] |
10.69 |
52.46; 53.84 |
1.38 |
-8.62 |
0.04 |
14.11 |
| vRNA |
2A43 |
7!A:11!A |
C:G |
rH_1 [tWH][-] |
11.12 |
26.44; 3.54 |
22.9 |
-135.54 |
0.01 |
9.15 |
| vRNA |
2A43 |
9!A:28!A |
C:G |
WC [cWW][XIX] |
10.6 |
54.3; 55.63 |
1.33 |
-10.27 |
0.51 |
19.54 |
| vRNA |
2A43 |
10!A:27!A |
C:G |
WC [cWW][XIX] |
10.51 |
54.66; 53.68 |
0.98 |
-11.38 |
0.28 |
14.54 |
| vRNA |
2A43 |
11!A:26!A |
G:C |
WC [cWW][XIX] |
10.53 |
55.37; 55.99 |
0.62 |
-17.01 |
0.45 |
29.33 |
| vRNA |
2A43 |
13!A:25!A |
C:A |
pfS [cSW][-] |
9.27 |
126.99; 31.6 |
95.39 |
-19.29 |
0.03 |
33.84 |
| vRNA |
2A43 |
14!A:23!A |
C:A |
pfS [cSW][-] |
9.37 |
127.97; 33.61 |
94.36 |
-18.1 |
0.37 |
19.22 |
| vRNA |
2A43 |
15!A:21!A |
G:A |
S(bp:N2-O2P)_2 [---][-] |
8.5 |
130.4; 23.17 |
107.23 |
132.13 |
1.21 |
8.81 |
| vRNA |
2A43 |
16!A:20!A |
C:A |
rpS(bs:O2-O2*) [cSS][-] |
5.56 |
107.1; 152.31 |
45.21 |
-37.09 |
0.93 |
20.67 |