Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2AKE BPC Identified: 26 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 2AKE 1!B:72!B G:C WC [cWW][XIX] 11.18 40.88; 50.62 9.73 7.35 0.02 16.23
tRNA 2AKE 2!B:71!B A:U Wb [---][-] 10.45 47.53; 67.7 20.17 -10.39 1.04 26.6
tRNA 2AKE 3!B:70!B C:G WC [cWW][XIX] 11.14 55.69; 52.91 2.78 -5.71 0.37 26.64
tRNA 2AKE 4!B:69!B C:G WC [cWW][XIX] 10.41 60.83; 58.93 1.9 -2.93 0.26 9.63
tRNA 2AKE 5!B:68!B U:G Wb [cWW][XXVIII] 10.4 68.91; 42.47 26.44 -6.41 0.51 7.95
tRNA 2AKE 6!B:67!B C:G WC [cWW][XIX] 10.5 57.81; 55.88 1.93 -9.46 0.12 19.05
tRNA 2AKE 7!B:66!B G:C WC [cWW][XIX] 10.5 59.97; 51.47 8.5 -8.38 0.16 13.64
tRNA 2AKE 9!B:22!B G:G rS* [tHH][-] 12.07 17.07; 21.28 4.21 -3.75 1.38 26.93
tRNA 2AKE 10!B:25!B G:C WC_Mo [cWW][XIX] 10.45 54.64; 69.44 14.8 9.63 0.66 19.68
tRNA 2AKE 11!B:24!B C:G Wb [---][-] 10.74 62.06; 38.05 24.01 1.77 0.43 7.81
tRNA 2AKE 12!B:23!B G:C WC [cWW][XIX] 10.04 57.34; 53.13 4.21 -23.36 0.67 43.17
tRNA 2AKE 14!B:21!B A:A pfS [cSW][-] 8.27 45.29; 128.15 82.86 10.34 0.64 42.81
tRNA 2AKE 15!B:59!B A:A pfS(sb:O2*-N1) [---][-] 9.05 147.23; 47.9 99.33 119.4 1.71 53.63
tRNA 2AKE 26!B:44!B G:A WC [cWW][VIII] 12.86 56.46; 50.34 6.12 -5.95 0.9 26.35
tRNA 2AKE 27!B:43!B U:A WC [cWW][XX] 11.89 42.64; 44.82 2.18 0.07 0.09 35.46
tRNA 2AKE 28!B:42!B C:G WC [cWW][XIX] 11.74 46.51; 53.72 7.2 1.57 0.08 22.38
tRNA 2AKE 29!B:41!B U:A WC [cWW][XX] 10.53 57.5; 57.15 0.35 7.08 0.12 7.34
tRNA 2AKE 30!B:40!B G:C WC [cWW][XIX] 11.0 52.56; 56.43 3.87 -2.93 0.21 26.19
tRNA 2AKE 31!B:39!B A:U WC [cWW][XX] 10.7 57.38; 51.83 5.55 -9.79 0.31 27.04
tRNA 2AKE 32!B:38!B C:A H_2 [---][-] 11.33 70.68; 8.73 61.95 49.39 0.57 19.19
tRNA 2AKE 49!B:65!B G:U Wb [cWW][XXVIII] 10.29 40.85; 70.9 30.05 -9.9 0.09 17.47
tRNA 2AKE 50!B:64!B C:G WC [cWW][XIX] 10.52 49.13; 56.03 6.9 -8.53 0.04 11.97
tRNA 2AKE 51!B:63!B G:C WC [cWW][XIX] 10.67 59.25; 51.92 7.33 -9.44 0.38 19.96
tRNA 2AKE 52!B:62!B U:A WC [cWW][XX] 10.63 52.23; 53.55 1.32 -6.64 0.45 14.44
tRNA 2AKE 53!B:61!B G:C WC [cWW][XIX] 10.42 49.0; 54.87 5.86 -22.63 0.08 26.13
tRNA 2AKE 54!B:58!B U:A rH_1 [tWH][XXIV] 10.23 39.45; 16.42 23.02 145.16 0.5 16.83