Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2AO5
BPC Identified: 20
Ambiguities: 0
dsRNA |
2AO5 |
1!A:10!B |
G:U |
Wb [cWW][XXVIII] |
10.34 |
40.84; 67.24 |
26.4 |
-10.08 |
0.52 |
13.69 |
dsRNA |
2AO5 |
2!A:9!B |
G:C |
WC [cWW][XIX] |
10.53 |
55.21; 54.64 |
0.56 |
-12.95 |
0.02 |
17.5 |
dsRNA |
2AO5 |
3!A:8!B |
C:G |
WC [cWW][XIX] |
10.37 |
57.6; 53.3 |
4.3 |
-8.73 |
0.15 |
15.05 |
dsRNA |
2AO5 |
4!A:7!B |
G:C |
WC [cWW][XIX] |
10.57 |
53.6; 53.74 |
0.14 |
-9.4 |
0.46 |
18.02 |
dsRNA |
2AO5 |
5!A:6!B |
U:G |
Wb [cWW][XXVIII] |
10.43 |
63.38; 41.72 |
21.66 |
-6.88 |
0.1 |
11.86 |
dsRNA |
2AO5 |
6!A:5!B |
G:U |
Wb [cWW][XXVIII] |
10.38 |
43.06; 62.47 |
19.41 |
-8.13 |
0.25 |
14.14 |
dsRNA |
2AO5 |
7!A:4!B |
C:G |
WC [cWW][XIX] |
10.59 |
57.17; 51.36 |
5.81 |
-9.8 |
0.05 |
11.85 |
dsRNA |
2AO5 |
8!A:3!B |
G:C |
WC [cWW][XIX] |
10.54 |
54.65; 57.16 |
2.51 |
-10.72 |
0.05 |
9.69 |
dsRNA |
2AO5 |
9!A:2!B |
C:G |
WC [cWW][XIX] |
10.55 |
56.65; 53.05 |
3.6 |
-11.76 |
0.11 |
14.72 |
dsRNA |
2AO5 |
10!A:1!B |
U:G |
Wb [cWW][XXVIII] |
10.43 |
65.51; 40.22 |
25.29 |
-9.31 |
0.38 |
15.97 |
dsRNA |
2AO5 |
1!C:10!D |
G:U |
Wb [cWW][XXVIII] |
10.36 |
39.67; 69.23 |
29.56 |
-13.66 |
0.15 |
15.46 |
dsRNA |
2AO5 |
2!C:9!D |
G:C |
WC [cWW][XIX] |
10.61 |
53.4; 55.44 |
2.04 |
-11.48 |
0.17 |
15.25 |
dsRNA |
2AO5 |
3!C:8!D |
C:G |
WC [cWW][XIX] |
10.71 |
53.42; 52.99 |
0.43 |
-10.51 |
0.05 |
14.04 |
dsRNA |
2AO5 |
4!C:7!D |
G:C |
WC [cWW][XIX] |
10.67 |
53.24; 52.68 |
0.57 |
-13.74 |
0.0 |
15.77 |
dsRNA |
2AO5 |
5!C:6!D |
U:G |
Wb [cWW][XXVIII] |
10.37 |
63.79; 43.45 |
20.34 |
-5.7 |
0.16 |
7.84 |
dsRNA |
2AO5 |
6!C:5!D |
G:U |
Wb [cWW][XXVIII] |
10.41 |
42.84; 61.74 |
18.91 |
-9.53 |
0.07 |
13.0 |
dsRNA |
2AO5 |
7!C:4!D |
C:G |
WC [cWW][XIX] |
10.38 |
56.78; 53.95 |
2.83 |
-13.58 |
0.33 |
17.84 |
dsRNA |
2AO5 |
8!C:3!D |
G:C |
WC [cWW][XIX] |
10.44 |
55.8; 56.31 |
0.5 |
-9.86 |
0.09 |
11.58 |
dsRNA |
2AO5 |
9!C:2!D |
C:G |
WC [cWW][XIX] |
10.59 |
56.19; 53.07 |
3.12 |
-14.34 |
0.25 |
18.12 |
dsRNA |
2AO5 |
10!C:1!D |
U:G |
Wb [cWW][XXVIII] |
10.33 |
67.59; 39.43 |
28.17 |
-16.29 |
0.07 |
17.69 |