Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2AZ0
BPC Identified: 18
Ambiguities: 0
dsRNA |
2AZ0 |
1!C:18!D |
G:C |
WC [cWW][XIX] |
10.7 |
52.29; 55.7 |
3.41 |
-9.51 |
0.15 |
11.49 |
dsRNA |
2AZ0 |
2!C:17!D |
C:G |
WC [cWW][XIX] |
10.58 |
56.71; 54.64 |
2.07 |
-11.25 |
0.33 |
18.29 |
dsRNA |
2AZ0 |
3!C:16!D |
A:U |
WC [cWW][XX] |
10.56 |
56.69; 53.45 |
3.24 |
-6.97 |
0.02 |
13.49 |
dsRNA |
2AZ0 |
4!C:15!D |
U:A |
WC [cWW][XX] |
10.28 |
57.88; 59.05 |
1.17 |
-4.37 |
0.02 |
5.14 |
dsRNA |
2AZ0 |
5!C:14!D |
G:C |
WC [cWW][XIX] |
10.6 |
55.82; 56.39 |
0.58 |
-0.93 |
0.04 |
6.72 |
dsRNA |
2AZ0 |
6!C:13!D |
G:C |
WC [cWW][XIX] |
10.62 |
53.85; 56.73 |
2.88 |
-3.59 |
0.11 |
9.95 |
dsRNA |
2AZ0 |
7!C:12!D |
A:U |
WC [cWW][XX] |
10.54 |
55.01; 56.72 |
1.71 |
-9.01 |
0.3 |
16.97 |
dsRNA |
2AZ0 |
8!C:11!D |
C:G |
WC [cWW][XIX] |
10.54 |
57.75; 56.79 |
0.96 |
-8.24 |
0.28 |
16.69 |
dsRNA |
2AZ0 |
9!C:10!D |
G:C |
WC [cWW][XIX] |
10.52 |
55.55; 56.74 |
1.19 |
-10.58 |
0.14 |
22.93 |
dsRNA |
2AZ0 |
10!C:9!D |
C:G |
WC [cWW][XIX] |
10.44 |
58.77; 56.82 |
1.95 |
-7.56 |
0.2 |
16.59 |
dsRNA |
2AZ0 |
11!C:8!D |
G:C |
WC [cWW][XIX] |
10.38 |
58.85; 58.59 |
0.26 |
-4.71 |
0.06 |
23.29 |
dsRNA |
2AZ0 |
12!C:7!D |
U:A |
WC [cWW][XX] |
10.43 |
55.69; 55.59 |
0.1 |
-9.29 |
0.13 |
16.85 |
dsRNA |
2AZ0 |
13!C:6!D |
C:G |
WC [cWW][XIX] |
10.74 |
57.58; 54.23 |
3.35 |
-8.4 |
0.01 |
12.66 |
dsRNA |
2AZ0 |
14!C:5!D |
C:G |
WC [cWW][XIX] |
10.63 |
55.19; 55.62 |
0.43 |
-2.11 |
0.03 |
8.85 |
dsRNA |
2AZ0 |
15!C:4!D |
A:U |
WC [cWW][XX] |
10.39 |
58.4; 55.82 |
2.58 |
-2.15 |
0.01 |
6.68 |
dsRNA |
2AZ0 |
16!C:3!D |
U:A |
WC [cWW][XX] |
10.2 |
57.91; 59.92 |
2.02 |
-5.91 |
0.06 |
7.86 |
dsRNA |
2AZ0 |
17!C:2!D |
G:C |
WC [cWW][XIX] |
10.51 |
55.06; 55.93 |
0.88 |
-11.64 |
0.17 |
16.61 |
dsRNA |
2AZ0 |
18!C:1!D |
C:G |
WC [cWW][XIX] |
10.66 |
55.86; 52.28 |
3.58 |
-11.24 |
0.28 |
15.38 |