Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2AZ2
BPC Identified: 18
Ambiguities: 0
dsRNA |
2AZ2 |
1!C:18!D |
G:C |
WC [cWW][XIX] |
10.69 |
52.8; 54.97 |
2.17 |
-6.89 |
0.29 |
11.24 |
dsRNA |
2AZ2 |
2!C:17!D |
C:G |
WC [cWW][XIX] |
10.76 |
53.59; 53.25 |
0.35 |
-13.07 |
0.0 |
11.65 |
dsRNA |
2AZ2 |
3!C:16!D |
A:U |
WC [cWW][XX] |
10.51 |
57.25; 56.24 |
1.01 |
-10.73 |
0.03 |
9.94 |
dsRNA |
2AZ2 |
4!C:15!D |
U:A |
WC [cWW][XX] |
10.38 |
57.21; 57.08 |
0.13 |
-6.01 |
0.0 |
9.41 |
dsRNA |
2AZ2 |
5!C:14!D |
G:C |
WC [cWW][XIX] |
10.61 |
55.77; 55.95 |
0.19 |
-1.65 |
0.12 |
7.68 |
dsRNA |
2AZ2 |
6!C:13!D |
G:C |
WC [cWW][XIX] |
10.65 |
54.23; 56.59 |
2.36 |
-7.69 |
0.24 |
12.31 |
dsRNA |
2AZ2 |
7!C:12!D |
A:U |
WC [cWW][XX] |
10.53 |
54.26; 55.59 |
1.33 |
-9.11 |
0.23 |
15.52 |
dsRNA |
2AZ2 |
8!C:11!D |
C:G |
WC [cWW][XIX] |
10.46 |
58.0; 58.45 |
0.45 |
-7.23 |
0.18 |
12.96 |
dsRNA |
2AZ2 |
9!C:10!D |
G:C |
WC [cWW][XIX] |
10.48 |
55.24; 57.53 |
2.3 |
-7.75 |
0.25 |
12.93 |
dsRNA |
2AZ2 |
10!C:9!D |
C:G |
WC [cWW][XIX] |
10.55 |
57.62; 55.03 |
2.59 |
-7.32 |
0.19 |
13.2 |
dsRNA |
2AZ2 |
11!C:8!D |
G:C |
WC [cWW][XIX] |
10.49 |
57.25; 59.22 |
1.98 |
-5.64 |
0.04 |
12.35 |
dsRNA |
2AZ2 |
12!C:7!D |
U:A |
WC [cWW][XX] |
10.59 |
55.19; 54.75 |
0.44 |
-6.02 |
0.16 |
14.29 |
dsRNA |
2AZ2 |
13!C:6!D |
C:G |
WC [cWW][XIX] |
10.62 |
57.49; 54.13 |
3.36 |
-9.37 |
0.02 |
12.55 |
dsRNA |
2AZ2 |
14!C:5!D |
C:G |
WC [cWW][XIX] |
10.66 |
56.19; 53.81 |
2.38 |
-8.28 |
0.12 |
11.81 |
dsRNA |
2AZ2 |
15!C:4!D |
A:U |
WC [cWW][XX] |
10.49 |
55.7; 56.31 |
0.62 |
-3.43 |
0.06 |
8.99 |
dsRNA |
2AZ2 |
16!C:3!D |
U:A |
WC [cWW][XX] |
10.42 |
59.03; 55.0 |
4.03 |
-10.02 |
0.15 |
11.07 |
dsRNA |
2AZ2 |
17!C:2!D |
G:C |
WC [cWW][XIX] |
10.69 |
53.87; 54.3 |
0.43 |
-6.7 |
0.0 |
10.83 |
dsRNA |
2AZ2 |
18!C:1!D |
C:G |
WC [cWW][XIX] |
10.68 |
55.6; 51.47 |
4.13 |
-9.96 |
0.43 |
7.79 |