Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2B3J
BPC Identified: 16
Ambiguities: 0
| tRNA |
2B3J |
28!E:42!E |
U:A |
WC [cWW][XX] |
10.8 |
45.17; 51.57 |
6.4 |
-20.73 |
0.16 |
26.01 |
| tRNA |
2B3J |
29!E:41!E |
U:A |
WC [cWW][XX] |
10.9 |
45.22; 53.35 |
8.13 |
-16.6 |
0.09 |
19.5 |
| tRNA |
2B3J |
30!E:40!E |
G:C |
WC [cWW][XIX] |
10.49 |
54.01; 59.34 |
5.33 |
-12.29 |
0.29 |
18.65 |
| tRNA |
2B3J |
31!E:39!E |
A:U |
WC [cWW][XX] |
10.69 |
55.84; 51.8 |
4.04 |
-10.97 |
0.32 |
17.64 |
| tRNA |
2B3J |
32!E:38!E |
C:A |
sWb [---][-] |
11.1 |
74.46; 24.35 |
50.11 |
-8.89 |
0.08 |
15.67 |
| tRNA |
2B3J |
28!F:42!F |
U:A |
WC [cWW][XX] |
11.15 |
41.08; 50.74 |
9.66 |
-22.43 |
0.54 |
39.88 |
| tRNA |
2B3J |
29!F:41!F |
U:A |
WC [cWW][XX] |
10.08 |
61.85; 55.43 |
6.42 |
-19.43 |
0.01 |
22.97 |
| tRNA |
2B3J |
30!F:40!F |
G:C |
WC [cWW][XIX] |
10.65 |
54.34; 55.02 |
0.68 |
-13.47 |
0.48 |
20.32 |
| tRNA |
2B3J |
31!F:39!F |
A:U |
WC [cWW][XX] |
10.97 |
56.36; 50.31 |
6.05 |
-12.67 |
0.59 |
22.55 |
| tRNA |
2B3J |
32!F:38!F |
C:A |
sWb [---][-] |
11.18 |
72.47; 25.99 |
46.48 |
-14.45 |
0.15 |
14.61 |
| tRNA |
2B3J |
32!G:37!G |
C:G |
WC [cWW][XIX] |
10.78 |
57.23; 50.2 |
7.02 |
4.71 |
0.08 |
17.95 |
| tRNA |
2B3J |
28!H:42!H |
U:A |
WC [cWW][XX] |
11.1 |
49.94; 53.0 |
3.07 |
-12.55 |
0.03 |
18.77 |
| tRNA |
2B3J |
29!H:41!H |
U:A |
WC [cWW][XX] |
10.74 |
54.42; 57.35 |
2.93 |
-13.26 |
0.07 |
19.76 |
| tRNA |
2B3J |
30!H:40!H |
G:C |
WC [cWW][XIX] |
10.72 |
58.45; 56.45 |
2.0 |
-10.26 |
0.53 |
19.53 |
| tRNA |
2B3J |
31!H:39!H |
A:U |
WC [cWW][XX] |
10.92 |
48.56; 51.84 |
3.28 |
-12.03 |
0.68 |
20.21 |
| tRNA |
2B3J |
32!H:38!H |
C:A |
sWb [---][-] |
10.96 |
77.12; 24.94 |
52.19 |
-9.34 |
0.22 |
15.62 |