Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2B8R
BPC Identified: 20
Ambiguities: 0
vRNA |
2B8R |
1!A:23!A |
C:G |
WC [cWW][XIX] |
10.76 |
53.36; 50.84 |
2.51 |
-15.66 |
0.2 |
18.81 |
vRNA |
2B8R |
2!A:22!A |
U:A |
WC [cWW][XX] |
10.6 |
54.5; 53.04 |
1.46 |
-18.11 |
0.08 |
21.12 |
vRNA |
2B8R |
3!A:21!A |
U:A |
WC [cWW][XX] |
10.73 |
56.06; 51.95 |
4.11 |
-15.48 |
0.13 |
17.0 |
vRNA |
2B8R |
4!A:20!A |
G:C |
WC [cWW][XIX] |
10.61 |
56.33; 52.61 |
3.72 |
-10.24 |
0.13 |
14.73 |
vRNA |
2B8R |
5!A:19!A |
C:G |
WC [cWW][XIX] |
10.59 |
57.65; 52.75 |
4.89 |
-14.39 |
0.08 |
17.97 |
vRNA |
2B8R |
6!A:18!A |
U:G |
Wb [cWW][XXVIII] |
10.21 |
71.7; 44.76 |
26.95 |
-18.56 |
0.29 |
24.89 |
vRNA |
2B8R |
7!A:17!A |
G:C |
WC [cWW][XIX] |
10.84 |
52.77; 55.8 |
3.04 |
-6.2 |
0.07 |
11.77 |
vRNA |
2B8R |
10!A:15!B |
G:C |
WC [cWW][XIX] |
10.55 |
54.02; 57.91 |
3.89 |
-10.05 |
0.06 |
10.36 |
vRNA |
2B8R |
11!A:14!B |
C:G |
WC [cWW][XIX] |
10.84 |
56.78; 52.82 |
3.96 |
-10.46 |
0.02 |
13.83 |
vRNA |
2B8R |
12!A:13!B |
G:C |
WC [cWW][XIX] |
10.57 |
52.67; 52.67 |
0.0 |
-13.47 |
0.19 |
13.06 |
vRNA |
2B8R |
13!A:12!B |
C:G |
WC [cWW][XIX] |
10.68 |
54.93; 54.29 |
0.64 |
-4.39 |
0.23 |
12.67 |
vRNA |
2B8R |
14!A:11!B |
G:C |
WC [cWW][XIX] |
10.93 |
53.3; 52.57 |
0.72 |
-11.43 |
0.14 |
13.3 |
vRNA |
2B8R |
15!A:10!B |
C:G |
WC [cWW][XIX] |
10.63 |
59.73; 54.51 |
5.22 |
-7.54 |
0.67 |
20.8 |
vRNA |
2B8R |
1!B:23!B |
C:G |
WC [cWW][XIX] |
10.48 |
55.06; 54.11 |
0.95 |
-10.19 |
0.03 |
12.29 |
vRNA |
2B8R |
2!B:22!B |
U:A |
WC [cWW][XX] |
10.3 |
56.72; 57.16 |
0.44 |
-10.06 |
0.11 |
13.83 |
vRNA |
2B8R |
3!B:21!B |
U:A |
WC [cWW][XX] |
10.48 |
56.75; 52.64 |
4.12 |
-16.32 |
0.33 |
14.58 |
vRNA |
2B8R |
4!B:20!B |
G:C |
WC [cWW][XIX] |
10.72 |
53.22; 55.26 |
2.04 |
-8.48 |
0.18 |
18.58 |
vRNA |
2B8R |
5!B:19!B |
C:G |
WC [cWW][XIX] |
10.82 |
54.87; 50.42 |
4.45 |
-12.87 |
0.34 |
21.94 |
vRNA |
2B8R |
6!B:18!B |
U:G |
Wb [cWW][XXVIII] |
10.57 |
70.04; 41.66 |
28.38 |
-14.07 |
0.09 |
23.82 |
vRNA |
2B8R |
7!B:17!B |
G:C |
WC [cWW][XIX] |
10.78 |
54.87; 50.52 |
4.35 |
-7.03 |
0.05 |
17.31 |