Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2BH2
BPC Identified: 15
Ambiguities: 0
| rRNA |
2BH2 |
1935!C:1938!C |
G:A |
pfS_1 [---][-] |
8.39 |
112.74; 77.37 |
35.37 |
-48.96 |
2.13 |
46.99 |
| rRNA |
2BH2 |
1938!C:1943!C |
A:U |
pfS(pb:O1P-N6) [---][-] |
14.03 |
6.84; 109.25 |
102.41 |
-177.2 |
0.29 |
7.14 |
| rRNA |
2BH2 |
1945!C:1961!C |
G:C |
WC [cWW][XIX] |
10.61 |
52.5; 58.81 |
6.31 |
-12.12 |
0.2 |
11.29 |
| rRNA |
2BH2 |
1946!C:1960!C |
U:A |
WC [cWW][XX] |
10.73 |
56.14; 55.03 |
1.1 |
-10.25 |
0.0 |
9.96 |
| rRNA |
2BH2 |
1947!C:1959!C |
C:G |
WC [cWW][XIX] |
10.67 |
58.98; 56.96 |
2.02 |
1.54 |
0.12 |
4.14 |
| rRNA |
2BH2 |
1948!C:1958!C |
G:C |
WC [cWW][XIX] |
10.66 |
55.93; 55.08 |
0.85 |
-3.38 |
0.1 |
11.85 |
| rRNA |
2BH2 |
1949!C:1957!C |
G:C |
WC [cWW][XIX] |
10.36 |
56.5; 54.24 |
2.26 |
-6.22 |
0.3 |
17.3 |
| rRNA |
2BH2 |
1935!D:1938!D |
G:A |
pfS_1 [---][-] |
8.24 |
117.13; 78.41 |
38.72 |
-46.44 |
1.79 |
42.72 |
| rRNA |
2BH2 |
1938!D:1943!D |
A:U |
pfS(pb:O1P-N6) [---][-] |
13.89 |
7.46; 108.32 |
100.86 |
-164.32 |
0.76 |
10.46 |
| rRNA |
2BH2 |
1945!D:1961!D |
G:C |
Wb [---][-] |
10.98 |
42.56; 56.11 |
13.55 |
-12.08 |
0.14 |
24.24 |
| rRNA |
2BH2 |
1946!D:1960!D |
U:A |
WC [cWW][XX] |
10.67 |
57.81; 54.09 |
3.72 |
-18.99 |
0.08 |
18.18 |
| rRNA |
2BH2 |
1947!D:1959!D |
C:G |
WC [cWW][XIX] |
10.91 |
55.19; 54.86 |
0.32 |
-8.29 |
0.35 |
15.58 |
| rRNA |
2BH2 |
1948!D:1958!D |
G:C |
WC [cWW][XIX] |
10.59 |
55.28; 52.87 |
2.42 |
-8.58 |
0.05 |
9.65 |
| rRNA |
2BH2 |
1949!D:1957!D |
G:C |
WC [cWW][XIX] |
10.63 |
53.31; 53.37 |
0.07 |
-12.29 |
0.66 |
19.58 |
| rRNA |
2BH2 |
1954!D:1955!D |
G:U |
pS* [cHS][-] |
5.87 |
140.86; 51.59 |
89.27 |
53.14 |
1.54 |
62.24 |