Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2BNY
BPC Identified: 9
Ambiguities: 0
| vRNA |
2BNY |
3!R:17!R |
A:U |
WC [cWW][XX] |
10.9 |
52.2; 52.45 |
0.25 |
-15.98 |
0.17 |
26.39 |
| vRNA |
2BNY |
4!R:16!R |
U:A |
WC [cWW][XX] |
10.23 |
58.58; 57.98 |
0.61 |
-11.49 |
0.24 |
17.24 |
| vRNA |
2BNY |
5!R:15!R |
G:C |
WC [cWW][XIX] |
10.63 |
54.13; 56.97 |
2.84 |
-5.65 |
0.05 |
8.45 |
| vRNA |
2BNY |
7!R:14!R |
G:C |
WC [cWW][XIX] |
10.55 |
52.12; 58.52 |
6.4 |
-6.66 |
0.22 |
10.59 |
| vRNA |
2BNY |
8!R:13!R |
G:C |
WC [cWW][XIX] |
10.63 |
51.2; 56.54 |
5.34 |
-0.5 |
0.04 |
8.63 |
| vRNA |
2BNY |
4!S:16!S |
U:A |
WC [cWW][XX] |
10.8 |
49.89; 54.51 |
4.62 |
3.86 |
0.58 |
15.04 |
| vRNA |
2BNY |
5!S:15!S |
G:C |
WC [cWW][XIX] |
11.39 |
53.82; 46.37 |
7.45 |
-7.3 |
0.07 |
15.04 |
| vRNA |
2BNY |
7!S:14!S |
G:C |
WC [cWW][XIX] |
11.11 |
52.98; 61.38 |
8.4 |
5.39 |
0.08 |
9.54 |
| vRNA |
2BNY |
8!S:13!S |
G:C |
WC [cWW][XIX] |
10.9 |
57.91; 51.92 |
5.99 |
4.63 |
0.0 |
4.04 |