Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2BYT BPC Identified: 82 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 2BYT 1!B:72!B G:C WC [cWW][XIX] 10.99 51.99; 49.11 2.88 -11.52 0.03 22.09
tRNA 2BYT 2!B:71!B C:G WC [cWW][XIX] 10.68 52.73; 55.09 2.37 -6.49 0.31 29.75
tRNA 2BYT 3!B:70!B C:G WC [cWW][XIX] 10.67 55.22; 55.23 0.01 -6.1 0.16 22.07
tRNA 2BYT 4!B:69!B G:C WC [cWW][XIX] 10.64 56.16; 54.44 1.72 -2.49 0.05 22.28
tRNA 2BYT 5!B:68!B G:C WC [cWW][XIX] 10.81 55.4; 52.78 2.62 -5.01 0.69 19.63
tRNA 2BYT 6!B:67!B G:C WC [cWW][XIX] 10.81 51.5; 53.01 1.51 -8.06 0.14 11.05
tRNA 2BYT 7!B:66!B G:C WC [cWW][XIX] 10.84 53.52; 51.67 1.84 -0.94 0.05 5.3
tRNA 2BYT 8!B:20A!B U:A fS(sb:O2*-N1) [tSW][-] 8.33 97.75; 57.05 40.7 144.28 0.04 32.31
tRNA 2BYT 8!B:14!B U:A rH_1 [tWH][XXIV] 9.94 34.28; 17.53 16.75 -172.56 0.18 2.11
tRNA 2BYT 9!B:12!B G:G H_1 [cWH][VI] 11.52 58.42; 28.99 29.44 6.93 0.21 16.06
tRNA 2BYT 10!B:25!B G:C WC [cWW][XIX] 10.57 55.11; 56.72 1.62 6.97 0.39 1.02
tRNA 2BYT 11!B:24!B C:G WC [cWW][XIX] 10.51 56.82; 56.34 0.47 -0.4 0.0 12.73
tRNA 2BYT 12!B:23!B G:C WC [cWW][XIX] 10.62 54.02; 55.29 1.27 -3.81 0.36 9.42
tRNA 2BYT 13!B:22!B G:A S [tSH][XI] 9.83 91.28; 4.89 86.39 -93.18 0.23 10.41
tRNA 2BYT 13!B:21!B G:G pfS_1 [cSW][-] 9.6 44.71; 124.99 80.28 -19.34 0.61 15.79
tRNA 2BYT 14!B:20A!B A:A pfS [cSW][-] 9.71 32.86; 113.96 81.1 -36.54 1.29 30.25
tRNA 2BYT 15!B:48!B A:U rWC [tWW][XXI] 10.89 29.36; 45.48 16.12 178.61 0.11 6.73
tRNA 2BYT 16!B:60!B U:U rS(bs:O2-O2*) [---][-] 4.4 105.19; 103.68 1.52 -141.03 0.63 43.67
tRNA 2BYT 18!B:55!B G:U fS_1 [tSW][-] 9.3 28.03; 102.07 74.04 -130.34 0.6 31.08
tRNA 2BYT 19!B:56!B G:C WC [cWW][XIX] 10.66 54.05; 51.53 2.52 -9.14 1.26 36.8
tRNA 2BYT 21!B:47F!B G:G rH_3 [---][-] 11.33 17.68; 68.65 50.98 -94.16 0.99 33.57
tRNA 2BYT 26!B:44!B G:U Wb [cWW][XXVIII] 10.61 37.51; 67.42 29.91 -7.26 0.2 7.43
tRNA 2BYT 27!B:43!B C:G WC [cWW][XIX] 10.72 53.86; 54.74 0.89 -8.62 0.65 20.84
tRNA 2BYT 28!B:42!B A:U WC [cWW][XX] 10.33 58.16; 57.57 0.59 -10.09 0.54 22.32
tRNA 2BYT 29!B:41!B U:A WC [cWW][XX] 10.62 52.43; 55.01 2.58 -10.1 0.69 27.82
tRNA 2BYT 30!B:40!B G:C WC [cWW][XIX] 10.53 55.22; 49.95 5.27 -13.71 1.63 46.36
tRNA 2BYT 32!B:38!B C:A WC [---][-] 10.76 59.49; 36.08 23.41 -35.89 0.79 58.51
tRNA 2BYT 45!B:47E!B G:C WC [cWW][XIX] 10.72 51.8; 54.27 2.47 4.78 0.25 0.89
tRNA 2BYT 46!B:47D!B C:G WC [cWW][XIX] 10.76 54.8; 54.87 0.07 5.55 0.09 5.02
tRNA 2BYT 47!B:47!B G:A S(sb:O2*-N7) [---][-] 7.44 84.83; 36.02 48.8 -171.91 0.03 52.59
tRNA 2BYT 47!B:66!E A:C rpS(sb:O2*-N3) [cSS][-] 5.45 95.3; 156.02 60.72 -54.18 0.48 47.6
tRNA 2BYT 47C!B:65!E A:C rpS(ss:O2*-O2*)_1 [cSS][-] 5.74 134.96; 113.97 21.0 -24.83 0.57 47.73
tRNA 2BYT 47C!B:49!E A:G rS [tSS][-] 8.91 50.87; 86.96 36.09 155.97 0.24 48.14
tRNA 2BYT 47D!B:50!E G:C rS(ss:O2*-O2*) [---][-] 5.79 157.56; 159.95 2.39 -121.32 0.01 15.15
tRNA 2BYT 49!B:47C!E G:A rS [tSS][-] 8.42 85.67; 59.66 26.01 166.75 0.09 12.45
tRNA 2BYT 49!B:65!B G:C WC [cWW][XIX] 10.66 54.03; 57.3 3.27 5.34 0.08 7.99
tRNA 2BYT 50!B:64!B C:G WC [cWW][XIX] 10.59 56.54; 56.18 0.37 1.37 0.3 3.68
tRNA 2BYT 51!B:63!B G:C WC [cWW][XIX] 10.79 53.91; 52.06 1.85 9.34 0.34 10.64
tRNA 2BYT 52!B:62!B G:C WC [cWW][XIX] 10.88 50.82; 53.17 2.35 -0.41 0.18 18.17
tRNA 2BYT 53!B:61!B G:C WC [cWW][XIX] 10.67 58.36; 53.36 5.01 3.36 0.3 21.06
tRNA 2BYT 54!B:58!B U:A rH_1 [tWH][XXIV] 9.83 28.22; 24.62 3.6 166.86 0.18 20.08
tRNA 2BYT 55!B:57!B U:A S(sb:O2*-N7) [---][-] 6.61 84.15; 40.05 44.09 -165.19 1.42 36.27
tRNA 2BYT 65!B:47C!E C:A rpS(bs:O2-O2*) [cSS][-] 5.65 108.96; 150.93 41.98 -33.21 0.84 6.82
tRNA 2BYT 66!B:47!B C:A rpS(sb:O2*-N3) [cSS][-] 5.94 148.39; 87.82 60.57 -54.15 0.21 30.67
tRNA 2BYT 67!B:47A!E C:C pfS(sb:O2*-N3) [---][-] 7.47 163.25; 38.03 125.22 164.55 0.36 42.89
tRNA 2BYT 1!E:72!E G:C WC [cWW][XIX] 10.99 52.11; 49.08 3.03 -11.07 0.07 21.95
tRNA 2BYT 2!E:71!E C:G WC [cWW][XIX] 10.68 52.66; 55.03 2.37 -6.7 0.31 29.58
tRNA 2BYT 3!E:70!E C:G WC [cWW][XIX] 10.68 55.37; 55.0 0.37 -5.53 0.16 21.69
tRNA 2BYT 4!E:69!E G:C WC [cWW][XIX] 10.64 56.22; 54.39 1.83 -2.35 0.09 22.54
tRNA 2BYT 5!E:68!E G:C WC [cWW][XIX] 10.82 55.55; 52.78 2.78 -4.3 0.68 20.6
tRNA 2BYT 6!E:67!E G:C WC [cWW][XIX] 10.82 51.56; 53.0 1.44 -8.03 0.12 10.93
tRNA 2BYT 7!E:66!E G:C WC [cWW][XIX] 10.83 53.64; 52.05 1.6 0.37 0.11 5.34
tRNA 2BYT 8!E:20A!E U:A fS(sb:O2*-N1) [tSW][-] 8.53 98.69; 53.92 44.77 148.28 1.25 25.76
tRNA 2BYT 8!E:14!E U:A rH_1 [tWH][XXIV] 9.95 34.46; 17.42 17.04 -171.72 0.18 2.05
tRNA 2BYT 9!E:12!E G:G H_1 [cWH][VI] 11.54 58.59; 28.85 29.73 9.28 0.55 17.16
tRNA 2BYT 10!E:25!E G:C WC [cWW][XIX] 10.59 55.03; 56.7 1.67 5.81 0.5 2.3
tRNA 2BYT 11!E:24!E C:G WC [cWW][XIX] 10.53 56.82; 56.55 0.27 -1.13 0.18 11.53
tRNA 2BYT 12!E:23!E G:C WC [cWW][XIX] 10.64 54.27; 54.98 0.71 -5.19 0.08 8.25
tRNA 2BYT 13!E:22!E G:A S [tSH][XI] 9.87 91.04; 3.69 87.35 -90.59 0.4 11.57
tRNA 2BYT 13!E:21!E G:G pfS_1 [cSW][-] 9.61 44.56; 124.66 80.1 -19.92 0.48 15.3
tRNA 2BYT 14!E:20A!E A:A pfS [cSW][-] 9.9 33.71; 111.91 78.2 -31.71 0.21 24.88
tRNA 2BYT 15!E:48!E A:U rWC [tWW][XXI] 10.88 29.39; 45.39 16.0 177.94 0.17 6.66
tRNA 2BYT 16!E:60!E U:U rS(bs:O2-O2*) [---][-] 4.39 105.16; 103.73 1.43 -140.94 0.7 44.49
tRNA 2BYT 18!E:55!E G:U fS_1 [tSW][-] 9.3 28.11; 101.98 73.87 -130.87 0.58 30.8
tRNA 2BYT 19!E:56!E G:C WC [cWW][XIX] 10.66 53.97; 51.67 2.3 -8.67 1.22 35.08
tRNA 2BYT 21!E:47F!E G:G rH_3 [---][-] 11.44 19.45; 66.15 46.69 -100.71 1.26 35.24
tRNA 2BYT 26!E:44!E G:U Wb [cWW][XXVIII] 10.61 37.57; 67.49 29.92 -7.16 0.2 8.38
tRNA 2BYT 27!E:43!E C:G WC [cWW][XIX] 10.74 53.75; 54.8 1.05 -8.48 0.64 20.59
tRNA 2BYT 28!E:42!E A:U WC [cWW][XX] 10.33 58.51; 57.47 1.05 -11.02 0.49 22.99
tRNA 2BYT 29!E:41!E U:A WC [cWW][XX] 10.61 52.49; 55.34 2.85 -10.54 0.68 27.71
tRNA 2BYT 30!E:40!E G:C WC [cWW][XIX] 10.53 55.36; 49.91 5.45 -13.7 1.64 46.17
tRNA 2BYT 32!E:38!E C:A WC [---][-] 10.76 59.54; 36.17 23.37 -35.68 0.79 58.36
tRNA 2BYT 45!E:47!E G:C WC [cWW][XIX] 10.73 51.02; 53.01 1.99 -1.72 0.17 5.56
tRNA 2BYT 46!E:47D!E C:G WC [cWW][XIX] 10.62 52.15; 52.97 0.82 3.22 0.07 6.53
tRNA 2BYT 47!E:47C!E G:A S_mo [tSH][XI] 10.22 86.83; 19.69 67.15 -141.84 0.47 20.14
tRNA 2BYT 49!E:65!E G:C WC [cWW][XIX] 10.65 54.39; 57.32 2.93 5.74 0.05 7.64
tRNA 2BYT 50!E:64!E C:G WC [cWW][XIX] 10.6 56.61; 56.43 0.18 1.5 0.24 3.76
tRNA 2BYT 51!E:63!E G:C WC [cWW][XIX] 10.79 54.17; 52.03 2.14 9.4 0.35 10.2
tRNA 2BYT 52!E:62!E G:C WC [cWW][XIX] 10.89 51.1; 52.92 1.82 -0.37 0.14 18.34
tRNA 2BYT 53!E:61!E G:C WC [cWW][XIX] 10.67 58.41; 53.36 5.05 3.31 0.3 20.36
tRNA 2BYT 54!E:58!E U:A rH_1 [tWH][XXIV] 9.84 28.32; 24.4 3.92 165.26 0.13 19.68
tRNA 2BYT 55!E:57!E U:A S(sb:O2*-N7) [---][-] 6.6 84.06; 40.41 43.65 -164.87 1.45 36.2