Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2C4Q
BPC Identified: 12
Ambiguities: 0
vRNA |
2C4Q |
2!R:18!R |
C:G |
WC [cWW][XIX] |
11.01 |
41.73; 59.16 |
17.43 |
-15.32 |
0.19 |
15.15 |
vRNA |
2C4Q |
3!R:17!R |
A:U |
WC [cWW][XX] |
10.61 |
53.2; 54.14 |
0.94 |
-14.82 |
0.14 |
16.32 |
vRNA |
2C4Q |
4!R:16!R |
U:A |
WC [cWW][XX] |
10.35 |
57.91; 54.76 |
3.15 |
-9.72 |
0.06 |
14.02 |
vRNA |
2C4Q |
5!R:15!R |
G:C |
WC [cWW][XIX] |
10.68 |
52.84; 54.62 |
1.77 |
-4.52 |
0.15 |
7.17 |
vRNA |
2C4Q |
7!R:14!R |
G:C |
WC [cWW][XIX] |
10.57 |
52.3; 57.79 |
5.49 |
-3.92 |
0.12 |
8.23 |
vRNA |
2C4Q |
8!R:13!R |
G:C |
WC [cWW][XIX] |
10.6 |
53.29; 58.12 |
4.83 |
1.7 |
0.02 |
1.8 |
vRNA |
2C4Q |
2!S:18!S |
C:G |
Wb* [---][-] |
11.55 |
39.49; 59.82 |
20.33 |
-19.77 |
0.03 |
25.81 |
vRNA |
2C4Q |
3!S:17!S |
A:U |
WC [cWW][XX] |
11.22 |
50.66; 60.1 |
9.44 |
-9.77 |
0.01 |
17.23 |
vRNA |
2C4Q |
4!S:16!S |
U:A |
WC [cWW][XX] |
10.65 |
55.39; 54.34 |
1.05 |
-10.95 |
0.15 |
18.8 |
vRNA |
2C4Q |
5!S:15!S |
G:C |
WC [cWW][XIX] |
10.66 |
50.64; 56.65 |
6.01 |
-5.22 |
0.11 |
5.64 |
vRNA |
2C4Q |
7!S:14!S |
G:C |
WC [cWW][XIX] |
10.88 |
58.46; 60.29 |
1.84 |
-6.91 |
0.04 |
12.39 |
vRNA |
2C4Q |
8!S:13!S |
G:C |
WC [cWW][XIX] |
11.24 |
54.25; 52.35 |
1.9 |
5.32 |
0.25 |
6.11 |