Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2C4Y
BPC Identified: 10
Ambiguities: 0
| vRNA |
2C4Y |
2!R:18!R |
C:G |
WC [cWW][XIX] |
10.61 |
50.89; 63.98 |
13.1 |
-8.52 |
0.02 |
11.73 |
| vRNA |
2C4Y |
3!R:17!R |
A:U |
WC [cWW][XX] |
10.3 |
56.31; 58.54 |
2.23 |
-18.13 |
0.24 |
18.86 |
| vRNA |
2C4Y |
4!R:16!R |
U:A |
WC [cWW][XX] |
10.31 |
60.24; 56.47 |
3.77 |
-7.64 |
0.14 |
9.34 |
| vRNA |
2C4Y |
5!R:15!R |
G:C |
WC [cWW][XIX] |
10.7 |
52.94; 54.44 |
1.5 |
-3.62 |
0.07 |
8.05 |
| vRNA |
2C4Y |
7!R:14!R |
G:C |
WC [cWW][XIX] |
10.61 |
51.71; 56.92 |
5.21 |
-3.78 |
0.19 |
8.46 |
| vRNA |
2C4Y |
8!R:13!R |
G:C |
WC [cWW][XIX] |
10.75 |
50.33; 60.53 |
10.2 |
1.42 |
0.13 |
3.87 |
| vRNA |
2C4Y |
4!S:16!S |
U:A |
WC [cWW][XX] |
11.02 |
48.84; 53.02 |
4.18 |
-10.25 |
0.24 |
16.96 |
| vRNA |
2C4Y |
5!S:15!S |
G:C |
WC [cWW][XIX] |
11.22 |
52.73; 52.32 |
0.41 |
-5.41 |
0.01 |
13.11 |
| vRNA |
2C4Y |
7!S:14!S |
G:C |
WC [cWW][XIX] |
11.08 |
55.19; 60.3 |
5.11 |
-1.29 |
0.2 |
9.9 |
| vRNA |
2C4Y |
8!S:13!S |
G:C |
WC [cWW][XIX] |
11.26 |
51.85; 51.39 |
0.46 |
4.77 |
0.04 |
8.32 |