Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2C4Z
BPC Identified: 10
Ambiguities: 0
vRNA |
2C4Z |
2!R:18!R |
C:G |
WC [cWW][XIX] |
10.59 |
53.05; 64.3 |
11.25 |
-3.74 |
0.33 |
17.73 |
vRNA |
2C4Z |
3!R:17!R |
A:U |
WC [cWW][XX] |
10.2 |
56.26; 61.95 |
5.69 |
-19.89 |
0.37 |
21.54 |
vRNA |
2C4Z |
4!R:16!R |
U:A |
WC [cWW][XX] |
10.2 |
62.95; 56.97 |
5.98 |
-6.41 |
0.18 |
7.47 |
vRNA |
2C4Z |
5!R:15!R |
G:C |
WC [cWW][XIX] |
10.76 |
54.59; 52.77 |
1.82 |
-0.28 |
0.02 |
6.43 |
vRNA |
2C4Z |
7!R:14!R |
G:C |
WC [cWW][XIX] |
10.68 |
51.44; 56.68 |
5.23 |
2.29 |
0.03 |
1.45 |
vRNA |
2C4Z |
8!R:13!R |
G:C |
Wb [---][-] |
11.1 |
48.0; 63.47 |
15.47 |
9.72 |
0.13 |
9.11 |
vRNA |
2C4Z |
4!S:16!S |
U:A |
WC [cWW][XX] |
11.2 |
48.3; 51.93 |
3.63 |
-12.29 |
0.52 |
22.44 |
vRNA |
2C4Z |
5!S:15!S |
G:C |
WC [cWW][XIX] |
11.47 |
52.41; 48.75 |
3.66 |
-6.66 |
0.04 |
14.89 |
vRNA |
2C4Z |
7!S:14!S |
G:C |
WC_Mo [cWW][XIX] |
11.29 |
52.69; 61.43 |
8.74 |
1.61 |
0.03 |
12.91 |
vRNA |
2C4Z |
8!S:13!S |
G:C |
WC [cWW][XIX] |
11.6 |
50.44; 53.24 |
2.81 |
9.83 |
0.07 |
11.23 |