Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2C50
BPC Identified: 8
Ambiguities: 0
| vRNA |
2C50 |
4!R:16!R |
U:A |
WC [cWW][XX] |
10.35 |
56.24; 58.95 |
2.71 |
-2.92 |
0.0 |
7.2 |
| vRNA |
2C50 |
5!R:15!R |
G:C |
WC [cWW][XIX] |
10.7 |
50.15; 56.75 |
6.6 |
-7.54 |
0.12 |
15.2 |
| vRNA |
2C50 |
7!R:14!R |
G:C |
Wb [---][-] |
10.53 |
48.49; 62.65 |
14.16 |
-4.75 |
0.11 |
9.03 |
| vRNA |
2C50 |
8!R:13!R |
G:C |
WC [cWW][XIX] |
10.86 |
49.43; 59.84 |
10.42 |
-0.09 |
0.0 |
1.87 |
| vRNA |
2C50 |
4!S:16!S |
U:A |
WC [cWW][XX] |
10.53 |
61.12; 54.14 |
6.98 |
-3.95 |
0.17 |
6.98 |
| vRNA |
2C50 |
5!S:15!S |
G:C |
WC [cWW][XIX] |
10.87 |
55.44; 54.62 |
0.82 |
-4.24 |
0.46 |
11.73 |
| vRNA |
2C50 |
7!S:14!S |
G:C |
WC [cWW][XIX] |
10.94 |
52.16; 63.51 |
11.36 |
-3.12 |
0.26 |
14.0 |
| vRNA |
2C50 |
8!S:13!S |
G:C |
WC [cWW][XIX] |
11.05 |
51.59; 56.55 |
4.96 |
3.26 |
0.1 |
9.73 |