Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2CSX BPC Identified: 61 Ambiguities: 1
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 2CSX 1!C:72!C G:C WC [cWW][XIX] 10.52 62.17; 58.21 3.95 -13.21 0.09 18.32
tRNA 2CSX 2!C:71!C G:C WC [cWW][XIX] 10.91 56.92; 54.0 2.93 -5.17 0.26 11.85
tRNA 2CSX 3!C:70!C C:G WC [cWW][XIX] 10.73 55.32; 57.25 1.93 -0.8 0.21 13.56
tRNA 2CSX 4!C:69!C G:C H_2 [---][-] 10.45 22.09; 63.73 41.65 4.51 0.06 12.48
tRNA 2CSX 5!C:68!C G:C WC [cWW][XIX] 10.9 59.8; 56.08 3.73 -3.38 0.08 8.06
tRNA 2CSX 6!C:67!C C:G WC [cWW][XIX] 10.56 58.1; 55.39 2.71 -6.96 0.19 15.23
tRNA 2CSX 7!C:66!C G:C WC [cWW][XIX] 10.51 52.18; 57.41 5.23 -4.51 0.08 11.58
tRNA 2CSX 8!C:14!C U:A rH_1 [tWH][XXIV] 9.48 30.06; 20.22 9.84 179.51 0.26 5.97
tRNA 2CSX 9!C:23!C A:A rS* [tHH][-] 11.15 7.35; 12.62 5.28 73.08 0.62 15.4
tRNA 2CSX 10!C:25!C G:C WC [cWW][XIX] 10.96 56.47; 56.47 0.0 -3.75 0.13 6.75
tRNA 2CSX 11!C:24!C C:G WC [cWW][XIX] 10.82 46.59; 57.23 10.64 -6.85 0.32 16.34
tRNA 2CSX 12!C:23!C U:A WC [cWW][XX] 10.72 52.72; 53.41 0.69 1.0 0.1 9.76
tRNA 2CSX 13!C:22!C C:G WC [cWW][XIX] 10.55 54.1; 52.7 1.41 -6.29 0.42 10.42
tRNA 2CSX 15!C:48!C G:C rWb [tWW][XXII] 10.44 32.92; 57.03 24.11 172.97 0.29 7.41
tRNA 2CSX 18!C:55!C G:U fS_1 [tSW][-] 9.48 23.2; 96.47 73.27 -159.76 1.0 27.13
tRNA 2CSX 22!C:46!C G:G rH_1 [tWH][VII] 11.34 31.62; 34.01 2.39 172.43 0.16 5.56
tRNA 2CSX 27!C:43!C G:C WC [cWW][XIX] 10.74 55.39; 63.15 7.76 -8.78 0.08 13.17
tRNA 2CSX 28!C:42!C G:C WC [cWW][XIX] 10.49 56.93; 57.87 0.94 -1.46 0.12 19.07
tRNA 2CSX 29!C:41!C G:C WC [cWW][XIX] 10.33 55.38; 66.09 10.71 -8.48 0.52 20.01
tRNA 2CSX 30!C:40!C A:U WC [cWW][XX] 10.6 59.36; 57.51 1.84 0.6 0.12 17.51
tRNA 2CSX 31!C:39!C U:G Wb [cWW][XXVIII] 10.73 64.19; 40.42 23.78 1.39 0.43 3.81
tRNA 2CSX 33!C:38!C U:A sWC [---][-] 11.02 84.93; 21.58 63.35 -3.27 0.86 64.2
tRNA 2CSX 33!C:35!C U:A pS [cSH][-] 8.88 114.59; 18.85 95.74 -16.86 0.34 82.77
tRNA 2CSX 49!C:65!C G:C WC [cWW][XIX] 10.47 48.77; 53.0 4.22 -5.1 0.04 8.83
tRNA 2CSX 50!C:64!C G:C WC [cWW][XIX] 10.54 55.5; 57.03 1.53 -4.18 0.48 20.75
tRNA 2CSX 51!C:63!C A:U WC [cWW][XX] 10.49 56.93; 57.32 0.39 -3.23 0.18 16.51
tRNA 2CSX 52!C:62!C G:C WC [cWW][XIX] 10.17 54.9; 58.68 3.78 -3.89 0.23 23.18
tRNA 2CSX 53!C:61!C G:C WC [cWW][XIX] 10.84 49.61; 54.19 4.58 -9.56 0.97 23.34
tRNA 2CSX 54!C:58!C U:A rH_1 [tWH][XXIV] 9.86 36.63; 16.75 19.89 152.56 0.51 17.63
tRNA 2CSX 55!C:57!C U:G S(sb:O2*-N7)_1 [---][-] 7.05 68.52; 38.85 29.68 -169.54 1.78 30.58
tRNA 2CSX 1!D:72!D G:C WC [cWW][XIX] 10.73 51.85; 55.5 3.66 -5.99 0.22 13.29
tRNA 2CSX 2!D:71!D G:C WC [cWW][XIX] 10.81 54.82; 63.81 8.99 2.12 0.19 15.03
tRNA 2CSX 3!D:70!D C:G WC [cWW][XIX] 11.17 58.23; 50.89 7.34 2.1 0.55 8.07
tRNA 2CSX 4!D:69!D G:C H_2 [---][-] 10.1 20.39; 66.78 46.39 -9.9 0.36 4.37
tRNA 2CSX 5!D:68!D G:C WC [cWW][XIX] 10.75 60.52; 50.2 10.32 -4.51 0.26 12.4
tRNA 2CSX 6!D:67!D C:G WC [cWW][XIX] 10.29 63.41; 53.69 9.72 -14.82 0.14 29.66
tRNA 2CSX 7!D:66!D G:C WC [cWW][XIX] 10.55 54.63; 60.53 5.9 -3.56 0.52 11.47
tRNA 2CSX 8!D:21A!D U:A fS(sb:O2*-N1) [tSW][-] 8.66 107.65; 50.39 57.26 158.24 0.23 19.74
tRNA 2CSX 8!D:14!D U:A rH_1 [tWH][XXIV] 9.74 31.34; 19.72 11.62 168.44 0.36 12.89
tRNA 2CSX 9!D:23!D A:A rS* [tHH][-] 11.43 2.66; 9.48 6.82 125.89 0.26 12.82
tRNA 2CSX 10!D:25!D G:C WC [cWW][XIX] 10.54 52.96; 53.66 0.7 -2.78 0.48 13.58
tRNA 2CSX 11!D:24!D C:G WC [cWW][XIX] 10.28 55.9; 59.93 4.04 -14.61 0.48 18.7
tRNA 2CSX 12!D:23!D U:A WC [cWW][XX] 10.21 51.62; 58.58 6.96 -6.44 0.46 12.11
tRNA 2CSX 13!D:22!D C:G WC [cWW][XIX] 10.74 54.05; 52.15 1.91 -9.1 0.07 9.56
tRNA 2CSX 15!D:48!D G:C rWb [tWW][XXII] 9.83 32.67; 69.85 37.18 165.71 0.24 15.93
tRNA 2CSX 18!D:55!D G:U fS_1 [tSW][-] 9.67 24.08; 99.14 75.06 -178.4 0.82 14.21
tRNA 2CSX 18!D:21!D G:C pS*(bs:N4-O2*) [---][-] 10.18 136.93; 11.2 125.73 72.73 1.26 7.75
tRNA 2CSX 22!D:46!D G:G rH_1 [tWH][VII] 11.44 29.97; 39.53 9.55 169.81 0.11 5.09
tRNA 2CSX 27!D:43!D G:C WC [cWW][XIX] 10.44 52.34; 55.75 3.41 -1.73 0.77 21.49
tRNA 2CSX 28!D:42!D G:C WC_Mo [cWW][XIX] 10.65 60.4; 61.45 1.05 13.17 0.01 15.06
tRNA 2CSX 29!D:41!D G:C WC [cWW][XIX] 10.63 59.92; 61.14 1.22 3.13 0.17 23.33
tRNA 2CSX 30!D:40!D A:U Wb* [---][-] 9.72 75.63; 57.08 18.54 -7.69 0.47 16.61
tRNA 2CSX 31!D:39!D U:G sWb [---][-] 10.6 76.99; 32.17 44.82 -11.41 0.54 16.62
tRNA 2CSX 33!D:38!D U:A sWC [---][-] 11.13 76.88; 20.23 56.64 8.1 0.72 57.33
tRNA 2CSX 49!D:65!D G:C WC [cWW][XIX] 11.37 56.72; 45.82 10.89 -7.31 0.04 13.82
tRNA 2CSX 50!D:64!D G:C Wb [---][-] 10.56 47.17; 61.03 13.85 -6.26 0.55 31.73
tRNA 2CSX 51!D:63!D* A:U WC [cWW][XX]; Wb* [---][-] 10.51 62.26; 49.97 12.29 -4.82 0.02 10.46
tRNA 2CSX 52!D:62!D G:C WC [cWW][XIX] 10.39 55.75; 59.57 3.82 -3.27 0.24 16.91
tRNA 2CSX 53!D:61!D G:C WC [cWW][XIX] 10.62 50.69; 53.23 2.54 -9.27 0.01 11.84
tRNA 2CSX 54!D:58!D U:A rH_1 [tWH][XXIV] 9.77 29.36; 16.42 12.94 165.17 0.31 10.49
tRNA 2CSX 55!D:57!D U:G S(sb:O2*-N7)_1 [---][-] 6.89 67.06; 41.93 25.13 178.11 2.7 15.97