Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2CV0 BPC Identified: 68 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 2CV0 501!C:572!C G:C WC [cWW][XIX] 10.81 50.59; 51.79 1.2 -12.07 0.21 14.64
tRNA 2CV0 502!C:571!C G:U Wb [cWW][XXVIII] 10.6 39.48; 67.05 27.57 -11.94 0.07 20.37
tRNA 2CV0 503!C:570!C C:G WC [cWW][XIX] 10.83 51.46; 53.15 1.7 -9.83 0.47 19.29
tRNA 2CV0 504!C:569!C C:G WC [cWW][XIX] 10.84 54.02; 54.6 0.58 -5.37 0.07 9.34
tRNA 2CV0 505!C:568!C C:G WC [cWW][XIX] 10.83 52.0; 52.78 0.77 -7.06 0.37 18.43
tRNA 2CV0 506!C:567!C C:G WC [cWW][XIX] 10.64 55.14; 53.74 1.4 -11.97 0.13 13.41
tRNA 2CV0 507!C:566!C A:U WC [cWW][XX] 11.04 55.64; 48.52 7.12 -4.3 0.11 10.13
tRNA 2CV0 508!C:521!C U:A fS(sb:O2*-N1) [tSW][-] 8.18 96.24; 59.13 37.11 158.6 0.06 23.16
tRNA 2CV0 508!C:514!C U:A rH_1 [tWH][XXIV] 9.67 31.96; 16.4 15.57 164.85 0.5 16.97
tRNA 2CV0 509!C:523!C C:G rS*_1 [tHH][-] 11.9 14.86; 6.63 8.23 117.26 0.4 10.59
tRNA 2CV0 510!C:525!C G:C WC [cWW][XIX] 10.72 51.84; 57.54 5.7 -1.53 0.22 9.1
tRNA 2CV0 511!C:524!C U:A WC [cWW][XX] 10.23 57.85; 59.99 2.15 -4.25 0.11 8.37
tRNA 2CV0 512!C:523!C C:G WC [cWW][XIX] 10.65 55.23; 54.67 0.56 -4.4 0.2 8.8
tRNA 2CV0 513!C:522!C U:G Wb [cWW][XXVIII] 10.2 72.28; 45.69 26.59 -1.02 0.2 5.32
tRNA 2CV0 514!C:521!C A:A pfS [cSW][-] 9.59 34.18; 121.7 87.52 -13.82 0.29 9.53
tRNA 2CV0 515!C:548!C G:C rWb [tWW][XXII] 10.86 40.94; 54.32 13.38 -169.24 0.45 4.45
tRNA 2CV0 518!C:555!C G:U fS_1 [tSW][-] 8.6 34.32; 111.9 77.58 -133.33 0.77 18.17
tRNA 2CV0 519!C:556!C G:C WC [cWW][XIX] 10.72 55.08; 49.64 5.44 -18.03 0.9 44.9
tRNA 2CV0 520!C:548!C U:C rH* [---][-] 13.05 6.76; 14.23 7.47 78.62 0.93 29.43
tRNA 2CV0 522!C:546!C G:A rH*_1 [tHW][-] 12.25 15.98; 22.79 6.82 -172.33 0.26 11.8
tRNA 2CV0 526!C:544!C G:A WC [cWW][VIII] 12.6 48.11; 50.24 2.13 -17.17 0.54 30.01
tRNA 2CV0 527!C:543!C C:G WC [cWW][XIX] 10.59 53.09; 56.69 3.59 -14.24 0.81 29.63
tRNA 2CV0 528!C:542!C G:C WC [cWW][XIX] 10.42 53.42; 56.12 2.69 -4.59 0.03 10.24
tRNA 2CV0 529!C:541!C G:C WC [cWW][XIX] 10.48 54.34; 55.25 0.92 -4.47 0.27 9.92
tRNA 2CV0 530!C:540!C C:G WC [cWW][XIX] 10.35 60.21; 54.67 5.54 -9.06 0.04 11.54
tRNA 2CV0 531!C:539!C C:G WC [cWW][XIX] 10.55 57.76; 52.93 4.82 -10.92 0.25 16.2
tRNA 2CV0 532!C:538!C C:A sWb [---][-] 10.97 82.41; 29.78 52.63 -7.11 0.47 17.61
tRNA 2CV0 549!C:565!C G:C WC [cWW][XIX] 10.78 52.4; 59.74 7.34 -5.46 0.54 13.46
tRNA 2CV0 550!C:564!C G:C WC [cWW][XIX] 10.74 53.16; 53.79 0.62 -4.28 0.14 12.71
tRNA 2CV0 551!C:563!C G:C WC [cWW][XIX] 10.68 58.08; 56.0 2.08 3.24 0.01 2.13
tRNA 2CV0 552!C:562!C G:C WC [cWW][XIX] 10.54 55.3; 56.87 1.57 0.33 0.36 9.02
tRNA 2CV0 553!C:561!C G:C WC [cWW][XIX] 10.93 55.9; 53.97 1.93 1.94 0.56 8.37
tRNA 2CV0 554!C:558!C U:A rH_1 [tWH][XXIV] 10.11 31.77; 18.64 13.13 176.51 0.67 3.47
tRNA 2CV0 555!C:557!C U:G S(sb:O2*-N7)_1 [---][-] 6.86 78.46; 39.38 39.09 -176.22 1.71 28.48
tRNA 2CV0 501!D:572!D G:C WC [cWW][XIX] 10.82 50.13; 51.38 1.25 -18.05 0.15 16.26
tRNA 2CV0 502!D:571!D G:U Wb [cWW][XXVIII] 10.62 37.85; 66.33 28.48 -13.58 0.12 19.58
tRNA 2CV0 503!D:570!D C:G WC [cWW][XIX] 10.77 51.19; 53.07 1.88 -11.1 0.74 22.83
tRNA 2CV0 504!D:569!D C:G WC [cWW][XIX] 10.74 55.15; 54.51 0.64 -2.79 0.63 14.76
tRNA 2CV0 505!D:568!D C:G WC [cWW][XIX] 10.74 52.02; 53.04 1.02 -8.0 0.57 17.44
tRNA 2CV0 506!D:567!D C:G WC [cWW][XIX] 10.64 55.73; 53.56 2.17 -10.36 0.17 14.69
tRNA 2CV0 507!D:566!D A:U WC [cWW][XX] 10.99 56.72; 47.38 9.35 -5.72 0.09 9.89
tRNA 2CV0 508!D:521!D U:A fS(sb:O2*-N1) [tSW][-] 8.18 96.42; 57.59 38.84 159.36 0.06 24.04
tRNA 2CV0 508!D:514!D U:A rH_1 [tWH][XXIV] 9.7 32.61; 17.29 15.32 164.2 0.42 17.06
tRNA 2CV0 509!D:523!D C:G rS*_1 [tHH][-] 11.87 15.51; 9.24 6.27 112.48 0.66 16.93
tRNA 2CV0 510!D:525!D G:C WC [cWW][XIX] 10.68 52.08; 58.18 6.1 -0.26 0.29 8.09
tRNA 2CV0 511!D:524!D U:A WC [cWW][XX] 10.17 58.91; 60.1 1.19 -4.31 0.03 8.56
tRNA 2CV0 512!D:523!D C:G WC [cWW][XIX] 10.65 54.92; 53.51 1.42 -0.84 0.22 6.22
tRNA 2CV0 513!D:522!D U:G Wb [cWW][XXVIII] 10.18 71.09; 46.26 24.83 1.08 0.19 4.91
tRNA 2CV0 514!D:521!D A:A pfS [cSW][-] 9.58 33.18; 121.15 87.97 -11.85 0.25 9.2
tRNA 2CV0 515!D:548!D G:C rWb [tWW][XXII] 10.9 41.07; 56.62 15.55 -171.66 0.35 1.44
tRNA 2CV0 518!D:555!D G:U fS_2 [---][-] 8.92 36.41; 113.09 76.68 -137.74 0.61 17.72
tRNA 2CV0 519!D:556!D G:C WC [cWW][XIX] 11.07 57.62; 49.26 8.37 -18.59 1.17 50.3
tRNA 2CV0 520!D:548!D U:C rH* [---][-] 12.84 9.3; 15.73 6.43 83.42 1.26 29.21
tRNA 2CV0 522!D:546!D G:A rH*_1 [tHW][-] 12.14 15.85; 21.79 5.94 -174.88 0.13 12.28
tRNA 2CV0 526!D:544!D G:A WC [cWW][VIII] 12.62 48.15; 49.84 1.68 -17.18 0.7 28.06
tRNA 2CV0 527!D:543!D C:G WC [cWW][XIX] 10.51 53.89; 56.72 2.83 -14.4 0.74 26.64
tRNA 2CV0 528!D:542!D G:C WC [cWW][XIX] 10.42 54.01; 55.58 1.57 -5.19 0.11 12.62
tRNA 2CV0 529!D:541!D G:C WC [cWW][XIX] 10.47 53.51; 55.05 1.54 -5.82 0.2 13.86
tRNA 2CV0 530!D:540!D C:G WC [cWW][XIX] 10.36 59.85; 54.16 5.69 -8.91 0.04 11.99
tRNA 2CV0 531!D:539!D C:G WC [cWW][XIX] 10.58 56.84; 51.97 4.87 -12.79 0.18 15.92
tRNA 2CV0 532!D:538!D C:A sWb [---][-] 10.99 81.26; 29.01 52.25 -11.92 0.62 15.66
tRNA 2CV0 549!D:565!D G:C WC [cWW][XIX] 10.81 52.07; 59.8 7.73 -9.04 0.05 11.92
tRNA 2CV0 550!D:564!D G:C WC [cWW][XIX] 10.75 53.22; 53.74 0.52 -3.42 0.07 9.64
tRNA 2CV0 551!D:563!D G:C WC [cWW][XIX] 10.74 58.14; 54.86 3.28 3.39 0.06 2.07
tRNA 2CV0 552!D:562!D G:C WC [cWW][XIX] 10.57 55.86; 56.33 0.47 1.13 0.43 7.08
tRNA 2CV0 553!D:561!D G:C WC [cWW][XIX] 10.95 55.86; 53.52 2.33 3.76 0.48 7.89
tRNA 2CV0 554!D:558!D U:A rH_1 [tWH][XXIV] 10.11 31.33; 18.6 12.73 178.43 0.67 3.5
tRNA 2CV0 555!D:557!D U:G S(sb:O2*-N7)_1 [---][-] 6.83 78.68; 39.75 38.94 -175.93 1.57 28.77