Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2CV1 BPC Identified: 65 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 2CV1 501!C:572!C G:C WC [cWW][XIX] 11.28 49.71; 53.42 3.71 -12.16 0.11 18.74
tRNA 2CV1 502!C:571!C G:U Wb [cWW][XXVIII] 10.59 40.4; 65.64 25.24 -13.67 0.3 14.25
tRNA 2CV1 503!C:570!C C:G WC [cWW][XIX] 10.81 53.42; 52.96 0.46 -10.58 0.51 19.04
tRNA 2CV1 504!C:569!C C:G WC [cWW][XIX] 10.61 56.07; 53.28 2.78 -5.62 0.18 8.59
tRNA 2CV1 505!C:568!C C:G WC [cWW][XIX] 10.81 53.06; 51.21 1.86 -7.76 0.01 11.74
tRNA 2CV1 506!C:567!C C:G WC [cWW][XIX] 10.66 55.99; 53.81 2.19 -13.31 0.12 15.5
tRNA 2CV1 507!C:566!C A:U WC [cWW][XX] 11.1 55.98; 51.01 4.97 -6.8 0.42 13.23
tRNA 2CV1 508!C:521!C U:A fS(sb:O2*-N1) [tSW][-] 8.32 93.67; 59.62 34.05 159.74 0.25 23.66
tRNA 2CV1 508!C:514!C U:A rH_1 [tWH][XXIV] 9.77 30.23; 16.3 13.93 161.09 0.74 19.21
tRNA 2CV1 509!C:523!C C:G rS*_1 [tHH][-] 11.79 14.7; 9.11 5.59 103.59 0.74 14.31
tRNA 2CV1 510!C:525!C G:C WC [cWW][XIX] 10.73 52.0; 57.48 5.48 -0.23 0.1 9.62
tRNA 2CV1 511!C:524!C U:A WC [cWW][XX] 10.34 56.76; 60.66 3.9 -5.16 0.15 11.5
tRNA 2CV1 512!C:523!C C:G WC [cWW][XIX] 10.67 54.37; 54.31 0.06 -1.05 0.08 3.62
tRNA 2CV1 513!C:522!C U:G Wb [cWW][XXVIII] 10.24 70.52; 45.7 24.82 0.0 0.03 2.09
tRNA 2CV1 514!C:521!C A:A pfS [cSW][-] 9.6 35.24; 122.61 87.37 -11.47 0.01 10.19
tRNA 2CV1 515!C:548!C G:C rWb [tWW][XXII] 10.85 41.63; 56.81 15.18 -167.88 0.5 6.34
tRNA 2CV1 518!C:555!C G:U fS_1 [tSW][-] 8.86 32.46; 108.99 76.54 -141.13 0.41 18.33
tRNA 2CV1 519!C:556!C G:C WC [cWW][XIX] 10.74 57.82; 55.87 1.95 -19.21 1.0 31.87
tRNA 2CV1 520!C:548!C U:C rH* [---][-] 13.0 6.09; 14.49 8.41 98.54 0.77 24.64
tRNA 2CV1 522!C:546!C G:A rH*_1 [tHW][-] 12.13 16.29; 24.53 8.24 174.96 0.21 10.2
tRNA 2CV1 526!C:544!C G:A WC [cWW][VIII] 12.52 49.02; 52.08 3.06 -16.57 0.6 30.16
tRNA 2CV1 527!C:543!C C:G WC [cWW][XIX] 10.68 56.02; 54.75 1.27 -18.17 0.95 32.35
tRNA 2CV1 528!C:542!C G:C WC [cWW][XIX] 10.41 55.4; 57.16 1.76 -4.68 0.1 7.54
tRNA 2CV1 529!C:541!C G:C WC [cWW][XIX] 10.3 53.3; 59.05 5.75 -4.12 0.19 11.69
tRNA 2CV1 530!C:540!C C:G WC [cWW][XIX] 10.25 64.61; 53.02 11.6 -10.19 0.02 10.93
tRNA 2CV1 531!C:539!C C:G WC [cWW][XIX] 10.58 59.66; 53.9 5.75 -10.57 0.27 14.46
tRNA 2CV1 532!C:538!C C:A sWb [---][-] 11.02 81.9; 28.71 53.19 -4.38 0.3 16.55
tRNA 2CV1 550!C:564!C G:C WC [cWW][XIX] 10.8 51.76; 56.04 4.28 1.58 0.13 7.56
tRNA 2CV1 551!C:563!C G:C WC [cWW][XIX] 10.66 57.41; 54.98 2.44 2.69 0.04 5.01
tRNA 2CV1 552!C:562!C G:C WC [cWW][XIX] 10.66 54.79; 53.24 1.55 -0.55 0.02 7.86
tRNA 2CV1 553!C:561!C G:C WC [cWW][XIX] 10.83 48.59; 54.67 6.08 -3.79 0.33 5.19
tRNA 2CV1 554!C:558!C U:A rH_1 [tWH][XXIV] 9.99 32.12; 18.07 14.05 176.62 0.26 5.66
tRNA 2CV1 501!D:572!D G:C WC [cWW][XIX] 10.5 50.41; 53.8 3.4 -13.55 0.15 13.93
tRNA 2CV1 502!D:571!D G:U Wb [cWW][XXVIII] 10.53 39.84; 66.69 26.84 -12.74 0.24 15.2
tRNA 2CV1 503!D:570!D C:G WC [cWW][XIX] 10.67 52.62; 53.4 0.78 -10.81 0.44 18.31
tRNA 2CV1 504!D:569!D C:G WC [cWW][XIX] 10.61 56.77; 52.96 3.81 -5.69 0.13 10.53
tRNA 2CV1 505!D:568!D C:G WC [cWW][XIX] 10.71 53.64; 52.08 1.56 -10.73 0.31 8.9
tRNA 2CV1 506!D:567!D C:G WC [cWW][XIX] 10.63 55.83; 54.02 1.82 -13.91 0.06 17.29
tRNA 2CV1 507!D:566!D A:U WC [cWW][XX] 11.03 54.53; 49.54 4.99 -7.14 0.03 10.75
tRNA 2CV1 508!D:521!D U:A fS(sb:O2*-N1) [tSW][-] 8.31 94.71; 58.99 35.72 160.05 0.08 24.24
tRNA 2CV1 508!D:514!D U:A rH_1 [tWH][XXIV] 9.84 31.43; 16.28 15.15 161.52 0.76 20.27
tRNA 2CV1 509!D:523!D C:G rS*_1 [tHH][-] 11.82 15.63; 11.18 4.46 97.09 0.97 16.97
tRNA 2CV1 510!D:525!D G:C WC [cWW][XIX] 10.71 52.94; 56.55 3.62 2.35 0.28 10.74
tRNA 2CV1 511!D:524!D U:A WC [cWW][XX] 10.32 57.35; 60.73 3.38 -3.92 0.08 10.29
tRNA 2CV1 512!D:523!D C:G WC [cWW][XIX] 10.68 55.29; 54.5 0.79 3.08 0.05 2.69
tRNA 2CV1 513!D:522!D U:G Wb [cWW][XXVIII] 10.28 70.14; 44.97 25.17 0.0 0.08 3.77
tRNA 2CV1 514!D:521!D A:A pfS [cSW][-] 9.63 34.73; 122.77 88.04 -11.01 0.09 10.36
tRNA 2CV1 515!D:548!D G:C rWb [tWW][XXII] 10.87 42.53; 59.83 17.3 -172.6 0.2 4.25
tRNA 2CV1 518!D:555!D G:U fS_2 [---][-] 8.99 34.82; 110.36 75.54 -144.63 0.38 18.01
tRNA 2CV1 519!D:556!D G:C WC [cWW][XIX] 10.86 59.8; 55.11 4.69 -21.3 0.87 33.2
tRNA 2CV1 520!D:548!D U:C rH* [---][-] 12.78 8.2; 17.0 8.8 102.55 0.93 24.25
tRNA 2CV1 522!D:546!D G:A rH*_1 [tHW][-] 12.11 16.61; 24.77 8.17 178.43 0.05 14.27
tRNA 2CV1 526!D:544!D G:A WC [cWW][VIII] 12.55 49.53; 51.83 2.3 -14.46 0.65 26.97
tRNA 2CV1 527!D:543!D C:G WC [cWW][XIX] 10.6 55.95; 55.29 0.66 -18.36 0.88 29.95
tRNA 2CV1 528!D:542!D G:C WC [cWW][XIX] 10.41 54.87; 56.34 1.47 -5.57 0.01 9.7
tRNA 2CV1 529!D:541!D G:C WC [cWW][XIX] 10.33 51.62; 58.16 6.54 -3.56 0.2 13.88
tRNA 2CV1 530!D:540!D C:G WC [cWW][XIX] 10.27 63.17; 52.26 10.92 -8.92 0.01 12.38
tRNA 2CV1 531!D:539!D C:G WC [cWW][XIX] 10.63 59.95; 52.68 7.28 -11.37 0.26 13.9
tRNA 2CV1 532!D:538!D C:A sWb [---][-] 11.04 81.83; 28.48 53.35 -6.73 0.43 15.55
tRNA 2CV1 549!D:565!D G:C WC [cWW][XIX] 10.03 50.41; 61.21 10.8 -7.39 0.32 12.26
tRNA 2CV1 550!D:564!D G:C WC [cWW][XIX] 10.81 51.89; 55.48 3.6 -1.81 0.15 7.4
tRNA 2CV1 551!D:563!D G:C WC [cWW][XIX] 10.73 57.92; 54.35 3.57 0.33 0.17 6.37
tRNA 2CV1 552!D:562!D G:C WC [cWW][XIX] 10.66 55.09; 52.72 2.37 -1.09 0.02 5.46
tRNA 2CV1 553!D:561!D G:C WC [cWW][XIX] 10.67 48.77; 53.36 4.58 -4.48 0.09 5.66
tRNA 2CV1 554!D:558!D U:A rH_1 [tWH][XXIV] 10.0 32.02; 17.65 14.37 179.11 0.18 5.73