Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2D6F BPC Identified: 63 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 2D6F 901!E:972!E A:U WC [cWW][XX] 11.32 47.52; 49.18 1.66 -11.51 0.24 19.96
tRNA 2D6F 902!E:971!E G:C WC [cWW][XIX] 10.35 54.89; 56.12 1.23 -6.96 0.24 28.2
tRNA 2D6F 903!E:970!E U:A WC [cWW][XX] 10.26 58.02; 58.39 0.37 0.02 0.23 9.82
tRNA 2D6F 904!E:969!E C:G WC [cWW][XIX] 10.55 55.02; 56.09 1.07 -6.34 0.54 8.08
tRNA 2D6F 905!E:968!E C:G WC [cWW][XIX] 10.79 52.79; 53.24 0.44 8.18 0.51 6.94
tRNA 2D6F 906!E:967!E C:G WC [cWW][XIX] 10.5 57.86; 56.66 1.2 -4.61 0.11 10.23
tRNA 2D6F 907!E:966!E G:C WC [cWW][XIX] 9.95 61.45; 58.61 2.84 -15.51 1.44 54.6
tRNA 2D6F 908!E:947!E U:A rpS(sb:O2*-N3) [cSS][-] 6.46 131.66; 80.77 50.9 -43.38 1.7 28.79
tRNA 2D6F 909!E:923!E G:C rS*_2 [---][-] 12.92 2.81; 8.32 5.51 103.4 0.72 22.65
tRNA 2D6F 910!E:945!E G:G pS_1 [cSH][-] 9.11 45.27; 120.95 75.68 11.65 0.98 19.58
tRNA 2D6F 910!E:925!E G:U Wb [cWW][XXVIII] 10.32 42.33; 82.91 40.58 -6.65 0.25 9.28
tRNA 2D6F 911!E:924!E G:C WC [cWW][XIX] 11.13 50.49; 53.82 3.33 1.23 0.4 17.97
tRNA 2D6F 912!E:923!E G:C Wb* [---][-] 11.78 72.52; 51.29 21.24 -15.53 0.45 36.12
tRNA 2D6F 913!E:922!E U:U Wb [cWW][XVI] 8.05 81.53; 57.84 23.69 -18.21 0.35 17.91
tRNA 2D6F 914!E:921!E A:A pfS [cSW][-] 10.11 43.26; 104.76 61.5 -1.89 0.79 19.39
tRNA 2D6F 915!E:948!E G:C rWb [tWW][XXII] 10.06 37.55; 76.26 38.71 163.12 0.56 35.53
tRNA 2D6F 916!E:959!E U:C rWC [tWW][XVII] 9.43 36.85; 29.47 7.37 -147.51 0.65 19.55
tRNA 2D6F 917!E:955!E G:U fS_1 [tSW][-] 8.54 30.16; 110.39 80.23 -168.4 2.04 41.78
tRNA 2D6F 918!E:956!E G:C WC [cWW][XIX] 10.39 65.55; 50.43 15.12 -24.14 0.01 35.94
tRNA 2D6F 920!E:960!E A:U WC [cWW][XX] 10.87 47.03; 45.29 1.73 -43.99 0.99 54.94
tRNA 2D6F 926!E:944!E G:C Wb* [---][-] 12.22 54.56; 38.39 16.18 -7.87 1.21 30.1
tRNA 2D6F 927!E:943!E C:G Wb [---][-] 11.09 55.94; 42.52 13.42 -9.61 0.28 16.32
tRNA 2D6F 928!E:942!E U:G Wb [cWW][XXVIII] 10.32 64.02; 40.52 23.5 -7.8 0.58 27.9
tRNA 2D6F 930!E:940!E G:C WC [cWW][XIX] 10.52 54.19; 61.39 7.2 -6.65 0.17 13.35
tRNA 2D6F 931!E:939!E G:C WC [cWW][XIX] 10.87 58.84; 44.91 13.93 1.58 0.55 10.95
tRNA 2D6F 932!E:938!E C:A WC [---][-] 11.19 59.2; 55.16 4.04 -3.88 0.58 13.82
tRNA 2D6F 949!E:965!E A:U WC [cWW][XX] 10.99 47.55; 51.42 3.86 1.98 0.28 22.09
tRNA 2D6F 950!E:964!E G:C WC [cWW][XIX] 10.2 57.77; 63.03 5.25 -7.87 0.61 19.37
tRNA 2D6F 951!E:963!E C:G WC [cWW][XIX] 10.92 50.25; 55.75 5.51 -7.69 0.13 15.41
tRNA 2D6F 952!E:962!E G:C WC [cWW][XIX] 10.12 52.9; 57.24 4.34 -15.24 0.13 22.5
tRNA 2D6F 953!E:961!E G:C WC [cWW][XIX] 10.42 54.38; 52.37 2.01 -13.28 0.42 26.67
tRNA 2D6F 954!E:958!E U:A rH_1 [tWH][XXIV] 9.57 35.79; 17.91 17.89 145.75 0.56 9.7
tRNA 2D6F 901!F:972!F A:U WC [cWW][XX] 10.4 48.12; 59.57 11.44 -8.73 0.45 16.71
tRNA 2D6F 903!F:970!F U:A WC [cWW][XX] 10.62 58.36; 56.57 1.8 -9.94 0.6 9.15
tRNA 2D6F 904!F:969!F C:G WC_Mo [cWW][XIX] 10.17 69.47; 60.65 8.82 -7.94 0.29 19.97
tRNA 2D6F 905!F:968!F C:G WC [cWW][XIX] 10.6 62.9; 53.79 9.11 4.2 0.0 8.87
tRNA 2D6F 906!F:967!F C:G WC [cWW][XIX] 9.92 60.79; 67.54 6.75 -12.13 0.42 24.11
tRNA 2D6F 907!F:966!F G:C WC [cWW][XIX] 10.52 65.37; 55.27 10.1 -5.54 0.79 2.08
tRNA 2D6F 908!F:947!F U:A rpS(sb:O2*-N3) [cSS][-] 5.93 135.24; 86.2 49.04 -69.17 2.32 22.76
tRNA 2D6F 908!F:921!F U:A rS(sb:O2*-N1) [---][-] 8.24 97.18; 48.81 48.37 157.93 1.56 37.99
tRNA 2D6F 908!F:914!F U:A rH_1 [tWH][XXIV] 9.64 29.69; 22.1 7.59 169.89 0.55 32.58
tRNA 2D6F 910!F:945!F G:G pS_1 [cSH][-] 8.1 40.28; 128.8 88.52 3.74 0.27 15.06
tRNA 2D6F 910!F:925!F G:U Wb [cWW][XXVIII] 9.75 50.19; 78.68 28.49 -1.56 0.17 4.83
tRNA 2D6F 911!F:924!F G:C WC [cWW][XIX] 10.45 56.69; 53.74 2.95 -2.92 0.29 13.83
tRNA 2D6F 912!F:923!F G:C WC [cWW][XIX] 11.34 55.17; 40.76 14.41 1.08 0.33 23.73
tRNA 2D6F 916!F:959!F U:C rWC [tWW][XVII] 9.28 31.69; 29.83 1.85 -143.97 0.27 19.39
tRNA 2D6F 917!F:955!F G:U fS_1 [tSW][-] 8.91 28.91; 100.81 71.9 -176.78 0.5 25.49
tRNA 2D6F 918!F:956!F G:C WC [cWW][XIX] 9.83 63.91; 53.03 10.87 -22.72 0.59 46.91
tRNA 2D6F 902!F:971!F G:C Wb [---][-] 9.97 56.46; 74.44 17.98 -16.08 0.44 22.47
tRNA 2D6F 926!F:944!F G:C WC [cWW][XIX] 10.6 58.81; 55.2 3.62 -14.05 1.25 29.53
tRNA 2D6F 927!F:943!F C:G Wb [---][-] 10.4 70.09; 52.85 17.24 -11.32 0.61 29.57
tRNA 2D6F 928!F:942!F U:G WC_Mo [---][-] 10.81 68.95; 55.38 13.57 13.22 0.08 14.25
tRNA 2D6F 929!F:941!F G:C WC [cWW][XIX] 10.97 47.61; 52.29 4.68 2.79 0.01 3.59
tRNA 2D6F 930!F:940!F G:C WC [cWW][XIX] 10.35 50.81; 61.05 10.24 -2.87 0.47 18.28
tRNA 2D6F 931!F:939!F G:C WC [cWW][XIX] 10.49 54.67; 55.72 1.06 -5.56 0.97 24.4
tRNA 2D6F 932!F:938!F C:A sWb [---][-] 10.36 80.83; 34.14 46.69 -1.99 0.27 4.64
tRNA 2D6F 949!F:965!F A:U WC [cWW][XX] 11.6 51.34; 41.47 9.87 1.48 0.51 13.19
tRNA 2D6F 950!F:964!F G:C WC [cWW][XIX] 10.61 58.8; 54.68 4.12 -3.64 0.44 14.24
tRNA 2D6F 951!F:963!F C:G WC [cWW][XIX] 10.7 51.37; 55.13 3.76 -1.07 0.15 12.68
tRNA 2D6F 952!F:962!F G:C WC [cWW][XIX] 10.46 54.33; 51.52 2.81 -5.27 0.11 7.92
tRNA 2D6F 953!F:961!F G:C WC [cWW][XIX] 10.42 56.68; 55.33 1.34 -9.96 0.35 15.48
tRNA 2D6F 954!F:958!F U:A rH_1 [tWH][XXIV] 9.65 27.24; 22.47 4.77 142.14 0.93 24.96
tRNA 2D6F 955!F:957!F U:G S(sb:O2*-N7)_1 [---][-] 6.65 73.4; 44.16 29.24 -172.11 1.38 35.42