Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2DEU BPC Identified: 45 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 2DEU 8!C:21!C U:A fS(sb:O2*-N1) [tSW][-] 9.23 92.36; 54.12 38.23 156.55 1.39 42.03
tRNA 2DEU 8!C:14!C U:A rH_1 [tWH][XXIV] 9.63 31.42; 22.95 8.48 157.58 1.33 41.12
tRNA 2DEU 9!C:23!C C:G rS*_1 [tHH][-] 11.55 7.48; 14.65 7.17 121.67 0.13 10.52
tRNA 2DEU 1!0C:25!C G:C WC [cWW][XIX] 10.24 50.46; 62.15 11.69 1.24 0.12 11.05
tRNA 2DEU 11!C:24!C U:A WC [cWW][XX] 10.07 57.11; 55.86 1.25 -8.84 0.48 24.05
tRNA 2DEU 12!C:23!C C:G WC [cWW][XIX] 10.66 61.27; 49.31 11.96 1.8 0.82 21.37
tRNA 2DEU 13!C:22!C U:G Wb [cWW][XXVIII] 10.31 70.67; 46.24 24.43 0.75 0.64 15.12
tRNA 2DEU 15!C:47!C G:C rWb [tWW][XXII] 9.96 43.51; 65.09 21.57 -169.78 0.37 8.35
tRNA 2DEU 15!C:20!C G:C fS*_2 [---][-] 8.22 100.52; 21.51 79.01 -148.33 0.72 26.48
tRNA 2DEU 17!C:55!C G:U fS_1 [tSW][-] 8.99 31.49; 95.16 63.68 -175.31 0.37 7.85
tRNA 2DEU 18!C:56!C G:C WC [cWW][XIX] 10.11 57.78; 52.23 5.55 -32.26 1.21 49.36
tRNA 2DEU 22!C:46!C G:A rH*_1 [tHW][-] 11.71 16.86; 27.12 10.25 -161.77 0.27 18.76
tRNA 2DEU 27!C:43!C C:G WC [cWW][XIX] 10.97 44.59; 53.87 9.27 -15.89 0.66 26.47
tRNA 2DEU 28!C:42!C C:G WC [cWW][XIX] 10.87 54.6; 61.93 7.33 -11.05 0.04 22.77
tRNA 2DEU 29!C:41!C G:C WC [cWW][XIX] 10.3 57.05; 59.74 2.68 -1.3 0.06 4.98
tRNA 2DEU 30!C:40!C C:G WC [cWW][XIX] 10.48 49.79; 55.05 5.26 -3.82 0.1 4.18
tRNA 2DEU 31!C:39!C C:G WC [cWW][XIX] 10.76 51.81; 49.07 2.74 1.78 0.07 2.23
tRNA 2DEU 50!C:64!C G:C WC [cWW][XIX] 11.16 59.17; 50.0 9.17 -7.31 0.16 29.22
tRNA 2DEU 51!C:63!C G:C WC [cWW][XIX] 10.55 59.87; 55.6 4.27 5.24 0.13 9.15
tRNA 2DEU 52!C:62!C G:C WC [cWW][XIX] 10.59 56.05; 48.6 7.45 -2.45 0.39 11.1
tRNA 2DEU 53!C:61!C G:C WC [cWW][XIX] 10.35 48.67; 58.79 10.12 -11.33 0.31 7.07
tRNA 2DEU 54!C:58!C U:A rH_1 [tWH][XXIV] 9.42 36.66; 16.04 20.62 -135.45 0.93 9.11
tRNA 2DEU 8!D:47!D U:C rpS(ss:O2*-O2*)_1 [---][-] 4.94 140.18; 127.38 12.79 9.15 2.62 43.71
tRNA 2DEU 8!D:21!D U:A fS(sb:O2*-N1) [tSW][-] 9.24 92.05; 54.31 37.74 156.69 1.37 42.13
tRNA 2DEU 8!D:14!D U:A rH_1 [tWH][XXIV] 9.64 31.32; 23.74 7.59 156.35 1.29 40.62
tRNA 2DEU 9!D:23!D C:G rS*_1 [tHH][-] 11.52 7.08; 14.85 7.77 121.2 0.18 10.54
tRNA 2DEU 10!D:25!D G:C WC [cWW][XIX] 10.25 50.25; 62.49 12.25 0.96 0.14 12.07
tRNA 2DEU 11!D:24!D U:A WC [cWW][XX] 10.07 57.17; 55.89 1.28 -9.33 0.52 25.16
tRNA 2DEU 12!D:23!D C:G WC [cWW][XIX] 10.64 61.52; 49.19 12.34 1.5 0.81 22.05
tRNA 2DEU 13!D:22!D U:G Wb [cWW][XXVIII] 10.31 69.87; 45.95 23.93 0.43 0.64 15.05
tRNA 2DEU 15!D:47!D G:C rWb [tWW][XXII] 9.96 43.59; 65.34 21.75 -171.01 0.32 7.83
tRNA 2DEU 15!D:20!D G:C fS*_2 [---][-] 8.21 100.92; 21.52 79.4 -148.32 0.66 25.63
tRNA 2DEU 17!D:55!D G:U fS_1 [tSW][-] 8.98 31.1; 95.21 64.11 -176.19 0.3 7.97
tRNA 2DEU 18!D:56!D G:C WC [cWW][XIX] 10.11 57.57; 51.94 5.63 -31.85 1.21 49.65
tRNA 2DEU 22!D:46!D G:A rH*_1 [tHW][-] 11.71 17.06; 27.0 9.93 -163.45 0.26 18.17
tRNA 2DEU 27!D:43!D C:G WC [cWW][XIX] 10.98 44.62; 53.91 9.29 -14.88 0.5 24.66
tRNA 2DEU 28!D:42!D C:G WC [cWW][XIX] 10.89 54.52; 61.89 7.36 -11.69 0.05 22.91
tRNA 2DEU 29!D:41!D G:C WC [cWW][XIX] 10.33 57.1; 59.66 2.56 -1.71 0.02 5.05
tRNA 2DEU 30!D:40!D C:G WC [cWW][XIX] 10.48 50.06; 54.79 4.73 -4.03 0.12 3.79
tRNA 2DEU 31!D:39!D C:G WC [cWW][XIX] 10.73 51.67; 48.89 2.78 2.25 0.12 2.81
tRNA 2DEU 50!D:64!D G:C WC [cWW][XIX] 11.17 59.26; 50.13 9.13 -6.35 0.15 28.89
tRNA 2DEU 51!D:63!D G:C WC [cWW][XIX] 10.55 59.83; 55.52 4.31 5.41 0.14 10.51
tRNA 2DEU 52!D:62!D G:C WC [cWW][XIX] 10.6 56.04; 48.47 7.57 -1.72 0.34 12.89
tRNA 2DEU 53!D:61!D G:C WC [cWW][XIX] 10.35 48.4; 58.7 10.3 -11.49 0.2 8.25
tRNA 2DEU 54!D:58!D U:A rH_1 [tWH][XXIV] 9.41 36.86; 16.49 20.37 -138.87 0.93 8.33