Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2DLC BPC Identified: 27 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 2DLC 501!Y:572!Y C:G WC [cWW][XIX] 10.67 50.88; 54.38 3.5 -17.77 1.25 35.18
tRNA 2DLC 502!Y:571!Y U:A WC [cWW][XX] 10.59 51.82; 54.63 2.81 -12.82 0.03 16.27
tRNA 2DLC 503!Y:570!Y C:G WC [cWW][XIX] 10.74 55.33; 52.98 2.35 -9.62 0.08 13.52
tRNA 2DLC 504!Y:569!Y U:G Wb [cWW][XXVIII] 10.41 68.87; 42.45 26.42 -9.09 0.25 13.71
tRNA 2DLC 505!Y:568!Y C:G WC [cWW][XIX] 10.81 50.77; 51.9 1.13 -4.6 0.08 9.18
tRNA 2DLC 506!Y:567!Y G:C WC [cWW][XIX] 10.6 54.52; 55.53 1.01 -3.77 0.02 13.7
tRNA 2DLC 507!Y:566!Y G:C WC [cWW][XIX] 10.86 56.97; 56.53 0.44 -0.98 0.28 11.69
tRNA 2DLC 508!Y:521!Y U:A fS(sb:O2*-N1) [tSW][-] 9.2 95.13; 45.08 50.05 166.65 0.07 13.37
tRNA 2DLC 508!Y:514!Y U:A rH_1 [tWH][XXIV] 10.22 30.37; 17.56 12.81 155.38 0.78 17.44
tRNA 2DLC 510!Y:545!Y G:G pS_1 [cSH][-] 9.77 35.41; 117.45 82.03 -6.25 0.03 28.97
tRNA 2DLC 510!Y:525!Y G:C WC [cWW][XIX] 10.6 50.79; 59.52 8.73 1.61 0.38 3.1
tRNA 2DLC 511!Y:524!Y C:G WC [cWW][XIX] 10.84 56.92; 55.93 0.99 -1.46 0.45 9.68
tRNA 2DLC 512!Y:523!Y C:G WC [cWW][XIX] 10.57 59.63; 51.28 8.36 -5.7 0.46 14.58
tRNA 2DLC 513!Y:522!Y A:A S [tSH][-] 9.95 91.11; 1.71 89.4 -36.18 0.51 11.53
tRNA 2DLC 515!Y:548!Y G:C rWb [tWW][XXII] 10.67 38.07; 56.58 18.51 -175.95 0.56 10.87
tRNA 2DLC 518!Y:555!Y G:U fS_PSU [---][-] 8.98 22.6; 124.43 101.83 -137.65 0.11 18.4
tRNA 2DLC 519!Y:556!Y G:C WC [cWW][XIX] 10.86 55.34; 53.29 2.06 -23.37 1.38 42.3
tRNA 2DLC 526!Y:544!Y G:A WC [cWW][VIII] 12.93 44.56; 44.1 0.46 -14.92 0.96 30.35
tRNA 2DLC 527!Y:543!Y C:G WC [cWW][XIX] 11.0 49.35; 53.73 4.39 -23.99 0.41 34.36
tRNA 2DLC 528!Y:542!Y A:U Wb [---][-] 10.92 37.89; 67.07 29.18 8.59 0.06 10.09
tRNA 2DLC 549!Y:565!Y G:C WC [cWW][XIX] 10.62 51.47; 56.56 5.09 -5.93 0.4 11.96
tRNA 2DLC 550!Y:564!Y G:C WC [cWW][XIX] 10.64 52.88; 52.92 0.04 -5.97 0.38 12.32
tRNA 2DLC 551!Y:563!Y G:C WC [cWW][XIX] 10.63 50.59; 52.49 1.9 -8.4 0.1 16.77
tRNA 2DLC 552!Y:562!Y C:G WC [cWW][XIX] 10.59 58.1; 54.43 3.66 -7.49 0.12 12.06
tRNA 2DLC 553!Y:561!Y G:C WC [cWW][XIX] 10.74 52.46; 51.27 1.19 -6.76 0.68 17.66
tRNA 2DLC 554!Y:558!Y U:A rH_1 [tWH][XXIV] 10.17 23.51; 24.14 0.63 151.57 0.3 13.63
tRNA 2DLC 555!Y:557!Y U:G S_PSU(sb:O2*-N7) [---][-] 7.33 90.06; 38.66 51.4 176.89 1.45 27.98