Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2DR5
BPC Identified: 12
Ambiguities: 0
| tRNA |
2DR5 |
1!B:31!B |
G:C |
Wb* [---][-] |
11.96 |
52.65; 41.88 |
10.77 |
-1.19 |
0.33 |
8.84 |
| tRNA |
2DR5 |
2!B:30!B |
G:C |
WC [cWW][XIX] |
10.93 |
49.66; 56.59 |
6.93 |
-14.83 |
0.17 |
17.73 |
| tRNA |
2DR5 |
3!B:29!B |
C:G |
WC [cWW][XIX] |
10.6 |
50.45; 56.01 |
5.56 |
-3.13 |
0.45 |
11.43 |
| tRNA |
2DR5 |
4!B:28!B |
C:G |
WC [cWW][XIX] |
10.68 |
54.78; 52.42 |
2.36 |
-5.45 |
0.48 |
13.1 |
| tRNA |
2DR5 |
5!B:27!B |
C:G |
WC [cWW][XIX] |
10.64 |
60.85; 60.79 |
0.06 |
-11.89 |
0.06 |
32.63 |
| tRNA |
2DR5 |
6!B:26!B |
G:U |
WC [---][-] |
10.72 |
56.95; 55.56 |
1.4 |
-7.66 |
0.22 |
11.4 |
| tRNA |
2DR5 |
7!B:25!B |
G:C |
Wb [---][-] |
10.76 |
41.95; 54.5 |
12.55 |
-3.96 |
0.35 |
13.57 |
| tRNA |
2DR5 |
10!B:22!B |
C:G |
WC [cWW][XIX] |
11.58 |
42.11; 47.29 |
5.17 |
9.38 |
0.81 |
20.66 |
| tRNA |
2DR5 |
11!B:21!B |
G:C |
WC [cWW][XIX] |
11.16 |
46.21; 53.06 |
6.85 |
-14.13 |
0.2 |
9.13 |
| tRNA |
2DR5 |
12!B:20!B |
G:C |
WC [cWW][XIX] |
11.13 |
53.72; 44.81 |
8.91 |
-14.41 |
0.01 |
17.9 |
| tRNA |
2DR5 |
13!B:17!B |
U:A |
rH_1 [tWH][XXIV] |
10.27 |
35.8; 14.3 |
21.5 |
171.62 |
0.29 |
9.99 |
| tRNA |
2DR5 |
14!B:16!B |
U:G |
S(sb:O2*-N7)_1 [---][-] |
6.71 |
83.88; 38.95 |
44.94 |
-178.47 |
1.62 |
21.0 |